Telmatocola sphagniphila: KIH39_05120
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Entry
KIH39_05120 CDS
T07229
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
tsph
Telmatocola sphagniphila
Brite
KEGG Orthology (KO) [BR:
tsph00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsph02000
]
KIH39_05120
01504 Antimicrobial resistance genes [BR:
tsph01504
]
KIH39_05120
Transporters [BR:
tsph02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KIH39_05120
Antimicrobial resistance genes [BR:
tsph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
KIH39_05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QVL33298
UniProt:
A0A8E6B7H3
LinkDB
All DBs
Position
1195927..1199673
Genome browser
AA seq
1248 aa
AA seq
DB search
MISRFFIDRPIFATVLSIFITLTGTIALLFLPIAQYPRITPPGVSVSISYPGASAEEVAD
AVGAPIEQLVNGVPGMLYMSSQSGNDGSYSLTVTFDIGTDLKTALVMVQNRVTLAMPLLP
TAVQNQGITIRKRTPDMLMIVNFISPDGRYDDKYLSNFATIYAKDELLRVDGVSDINIQG
QRDYSMRIWLDPQKLASRNMTAIDVAQSLMTQNIDAPAGRIGQPPIDPGQSFQLPLDTIG
RLNEIEQFENIVIKIGGSPPILSPMGKLISDIPAVPVVSSIVSSLTPNKNLNTSPANIPL
LSGLTAPNPSDNLNASTITLPSSTPIPSTPVSPLTVAAPATTTTNTDTGTLTTTNSNSMT
GSEATGGGVGALGLSSGSSTASMPSPSASIVRLKDVARVELGAQNYNTICSFDGRPSVGL
GLYQLPGTNALEVAQRVRKRMEELRVNFPDGIDYKIGYDTTTFVADSVNDVIKTLLEALG
LVAIVVLIFLQSWRASIIPLLAVPVSIIGTFSMMAALGYSLNNISLFGLVLAIGIVVDDA
IVVVENVERWMDLGLSSLEATKKAMDEVTGPIIAVALVLCAVFVPCAFIPGMTGQFFRQF
AVTIAVSTLFSTINSLTFSPAIAAILLRPRHAKLDPLAWVMKYTLGWFFWIFNKIFNFGT
NSYAWTVGILMRVNLLVILVYIGLLILTVRIFQITPKGFIPQQDQGRLIVNLQLPDSASL
ERTSAAVALVEKIARETPGVAHTVTNAGMSFLLQANSPNFASMFVVLDPFEKRQKPELRD
TAIMTKLRARWAEEVKDGTVTVFGAAPVPGLGVAGGFKFLIQDRAGSGVEVLQEQLDEFV
RKIKKVPGMKSATSQFRSKTPQVYLDVDRSKAASLGISFDDINQTLSIYLGSVYVNSYND
FGRHWQVTLQAEGKFRSQMEDISLFQIRNSSGQMVPLSTLVHAQEIGGPISVTRYNLYTA
AAVNGNVEVGSDGQAIAAINQLAQDTLPLTMKIEWTELMFMQIRAGSTAIYVFILAVISV
FLALSALYESWSLPLAVILVVPLCLLCSVEGVRIAEKDVNIFVQIGLVVLVGLACKNAIL
IVEFAKQMYDAGHSRYDSTKEASRLRLRPILMTSFAFIFGVMPLLVASGAGAEMRRSLGT
AVFSGMLGVTVFGIFMTPVFFYVIQGLSDSRFFSSTRARAITRYLSVGAVGAFGGFAVSG
LGRGTILIDCSIGAALGMLLVRLVRGLSVTQILPKNNYEHLPKAAEEK
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgatctctcgcttttttatcgatcgtcccatcttcgcgacggtcctctcgatcttcatc
acgttaacgggaacgattgcgctactgtttttgccgatcgctcaatatccgcgcattact
ccgcccggcgtctccgtctccatcagctaccccggcgccagtgccgaggaggtcgcggat
gcggtgggggcacctatcgaacagctcgtcaacggcgtgccaggcatgctctatatgtcc
tcccaatcgggcaacgatgggagctacagcctgacggttaccttcgatatcggtaccgat
cttaagaccgcgctggtgatggtgcagaatcgcgtgactctggcaatgccgctgttacca
acggccgtgcagaaccagggcatcaccattcgaaaacgaactcccgacatgctgatgatt
gtaaacttcatctctcccgacgggcggtatgatgataagtatctcagcaattttgcgact
atttacgccaaggacgagctgctaagagtcgatggcgtttccgatatcaacattcaaggc
cagcgcgattacagcatgcggatctggctcgatccacagaagctcgcttctagaaatatg
actgcgatcgatgtcgcgcaatctctgatgactcagaatattgatgcaccggcgggacga
atcggacaaccgccgattgatccgggtcagtcgtttcaacttccgctcgacacgatcggc
cgtctgaatgaaatcgaacaatttgagaacatcgttatcaagattgggggcagtcccccc
atactttctccgatgggaaaactgatctcggatatcccggccgttccggttgtgagttcg
attgtcagtagtctcacgccaaacaagaatctgaacacctcacccgccaacatacccctt
ctgtctggcctgacagcgcccaatcccagcgataacttaaacgcttccacgatcacgttg
ccctcgagtactcccataccttctactcccgtgagtcctctcacggttgctgcgccggcc
accactacgacgaatacagatacaggcacactcactaccacgaatagtaattcgatgacc
ggaagtgaggctacggggggtggggtcggtgcactcggcttgtccagcggcagctcgacc
gcttccatgccttcaccttctgccagcatcgtgcgactcaaagatgtggctcgcgtcgaa
ctgggagctcagaattacaacacgatctgttctttcgatggccgcccctccgtcggtttg
ggactctatcaactccccggaaccaatgccctggaagttgcccagagagttcgcaaacgc
atggaagaactccgagttaactttccggatggtatcgattacaaaattggttacgacaca
acgacattcgtagcggattctgttaacgatgtgatcaagacgctccttgaagctctcggc
ttagtggcgatcgtcgttctcatttttcttcaaagctggcgggcttcgatcattccgcta
ctggctgtgccggtttcgataatcggcacgttctcaatgatggcggccctaggctatagc
ctgaataatatttcgctcttcggcttggttctggcaattgggattgtcgtcgacgatgca
attgtggttgtcgaaaacgtggagcgctggatggatctgggtctcagctcactcgaggcc
accaaaaaggccatggatgaagtgactgggccgatcatcgctgtagccttagtgctctgt
gccgtgttcgttccctgtgcattcattccgggaatgaccggccagtttttccgacagttt
gcggttacgattgcagtttcgacgctcttctccacgattaattcgctcactttcagtccc
gccatcgccgcaattcttctcaggccccgtcacgcaaagttagatcccctggcatgggtg
atgaaatataccctgggctggttcttctggatcttcaacaaaatattcaatttcggaacg
aatagttatgcttggaccgtcggaattttgatgcgggtcaatcttctggtgattctcgtt
tacatcggtcttctcattctgacggttcgaatttttcagattacccccaaaggatttatc
ccgcagcaggaccagggacgtctgattgtaaacctgcaattgccggactcggcctctctc
gaacgaacttcggccgcagtcgcactcgtcgaaaagattgccagagaaactcctggagtg
gcgcacaccgttaccaacgcgggaatgtcatttttattgcaagcgaatagtcccaacttt
gcctccatgttcgttgtgctcgatccttttgaaaaacgtcagaagcctgagcttcgcgac
accgcgataatgacgaaacttcgcgcacgttgggcagaagaagtcaaagatggcactgtg
acagtttttggagccgcacccgttccgggattgggagttgccggaggtttcaaattcctg
attcaggaccgggctggttcaggtgtggaggtgcttcaagaacagttggatgaattcgtc
cgcaagatcaaaaaagttcccgggatgaagagtgcgacatcgcagtttcgttcgaaaacc
cctcaggtttatttggatgtcgatcgttccaaggccgcctctctggggatctcgtttgac
gacataaatcagacactgagcatctatttgggttcagtttacgttaacagctacaacgac
ttcggtcgccactggcaggttacccttcaggcagaagggaaattccgcagtcagatggaa
gatatctctcttttccagatcagaaatagcagcgggcagatggttcccctgagcactctc
gttcatgcccaagagattggcggaccaatatcagttacccgttacaatctgtacacggcg
gccgctgtaaatggcaatgtggaagtggggagcgatggtcaagctatagcggctatcaat
caactcgcacaggacacgttacccttaacgatgaaaatcgaatggaccgaattgatgttc
atgcaaattcgggccggcagtacggcgatttacgtgttcatacttgctgtgatcagcgtc
ttcttggctctttcagctctgtatgaaagctggtcgttgccgctggcggttatcctggtg
gttccactttgtttgctctgttcggtcgaaggggttcgaatcgccgagaaagacgtcaat
attttcgtacagatcggcctagttgtgcttgtgggattggcttgcaaaaatgcgattttg
atcgtcgaattcgccaagcaaatgtatgacgcggggcattcccgatacgattccacgaaa
gaggcctcgcgtcttcgcctccgaccgattctgatgacttccttcgcttttattttcggc
gtgatgccacttttggtcgcgtccggtgccggagcggaaatgcgtcggtccctcgggact
gccgtgttcagcgggatgctgggagtgactgtcttcggaatctttatgactccggtcttt
ttctatgtgattcagggactaagcgattctcgatttttctcctcgactcgagcgcgagca
attactcgttatctttctgtcggcgctgtcggcgcgttcgggggatttgccgtttccggt
ctggggcgtggcacgatactgatcgattgctcgatcggagcggcgctgggcatgctgctc
gttcgcctggttcgtggtctttcggtgactcaaattttgcccaaaaataattatgaacat
ctgccgaaagcggctgaggagaaatag
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