Thamnophis sirtalis (common garter snake): 106539698
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Entry
106539698 CDS
T06107
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr02010
ABC transporters
tsr04145
Phagosome
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106539698
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106539698
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106539698
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsr02000
]
106539698
Enzymes [BR:
tsr01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
106539698
Transporters [BR:
tsr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
106539698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_15
AAA_21
AAA_29
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
106539698
NCBI-ProteinID:
XP_013910024
UniProt:
A0A6I9X3Z3
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MMLQQDTKKFVNKRTLTSRLSKDTTMMSRSVPLNTNVFLRNLVKSVGLYVFMIGLSWRLT
LLMLIETPLMMAVQKVYNARHQALLKAIQDSVACSEEVVREVISSMETVRSFATEEEESE
RYEASLGDTCRLKNQRDLERILYLFVVWFVKHYEMTGALASRLSKETTMMSRSVPLNTNV
FLRTLIKAIGLYMFMIGLSWRLTLLMLIETPLMMAAQKVYDGRRQAERKGIVRVHPYHCP
QGKTGKGGGYFMPVATRRNREVAEKEDEEANLKNVFFELCPGEVTALVGPNGSGKSSCVA
LLEHFYEPQSGEVLLDGVPVGKYEHKYLHRQVREDGAAWLGAAEAVGFATRSGQEDLRDG
FVLQPSIVLAYLPAEVGEKGGIHPESLLDHCFLFPIQQSVKSGGRTVLVIAHQMQTVENA
DKIVVLEGGEVVEKGTHTELMGRRGPYYRLMERTQPEGLLELQGGAQP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccagcaggacaccaaaaagtttgtgaacaagaggacgctgacctcccgcctt
tccaaagacacaactatgatgagccgctcggtgccgctcaacaccaatgtcttcctgcgc
aacctggtcaagtccgttgggctctacgtattcatgatcggcctgtcctggcgcctgacg
ctgctgatgctgatcgagaccccactcatgatggccgtccagaaggtctacaatgcccga
caccaggctttgctgaaggccatccaggactccgtggcctgttcagaggaggtggtgcgt
gaggtcatctcgtccatggagaccgtacgcagctttgccaccgaggaggaggagtcagag
cgttacgaggcatccttgggggacacttgccggctgaagaaccaaagggacttggaaagg
atcctttacctatttgttgtatggtttgtcaaacattatgagatgacaggggcgctggcc
tcccgcctttccaaagagacaactatgatgagccgctcagtgccgctcaacaccaacgtc
ttcctgcgcaccctgatcaaggccattgggctctacatgttcatgatcggcctgtcctgg
cgcctgacgctgctgatgctgatcgagaccccactcatgatggccgcccagaaggtctat
gatggccgtcgtcaggctgaaagaaaagggattgtgcgtgtgcacccctatcattgtcct
caagggaagacaggaaaaggaggaggttacttcatgccagtagctacaagaaggaacaga
gaagtagctgaaaaagaggatgaggaagccaatttgaagaatgtcttctttgagctctgc
cctggggaagtgacggccttggtgggcccaaacggcagcggaaagagcagctgcgtcgcc
ctcctggagcacttctatgaaccccaatccggggaggtcctgctggacggagtcccagtt
gggaaatacgagcacaagtatctccataggcaggtgagagaggacggagcagcctggttg
ggagcagcagaggctgttggctttgctacccgttcggggcaagaagatttaagggatggc
tttgtcttgcaaccctccatcgttcttgcttatcttcctgcagaagtgggggagaaagga
ggaatccacccagaatctcttctggatcactgcttccttttccccatccagcagtctgtg
aagagtggaggccggacggtgctggtgattgctcaccagatgcagacggtggagaacgca
gacaagattgtggtgctggaaggaggggaggttgtggagaaggggactcacacggagctg
atgggccggagaggcccctactacagactgatggaaaggacccagccggagggacttctg
gagttgcaagggggagctcagccatag
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integrated database retrieval system
