Thamnophis sirtalis (common garter snake): 106540770
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Entry
106540770 CDS
T06107
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsr03016
]
106540770
Enzymes [BR:
tsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
106540770
Transfer RNA biogenesis [BR:
tsr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106540770
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Motif
Other DBs
NCBI-GeneID:
106540770
NCBI-ProteinID:
XP_013911497
UniProt:
A0A6I9XCB7
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Position
Unknown
AA seq
400 aa
AA seq
DB search
MDTPADTWDNLHAHLTFLWLNRFYLYSCAAFGISLWFCFQFLNKAKEQNKNRLAEFRIPK
ITAAEKEQQDPSLQKVHVAGVKVFYGSQTGTAKRFALVLTEAVASINLPAEIINMEDYDP
DDSLIDEISSQNICVFLVATYTDGKPTANAAWFCKWLEETANDFRVGKAYLKGLRYAVFG
LGNSVYADHFNTVSRNLDKWLWMLGARRILSCALGDSNVVKSQHGSIEADFEAWKAKLLT
RLQALAKGDQKACSGRCKKGQCRSKSKGSQEAKEQETSKHGGKEVSGEDWCVALFLNYTV
LFFRHHTNPVGTEWRWKMDRPEMILQEAIENHQNLIKQFKGVPGVRDDRFREGMEAKHCA
LSLVGEPIMYPQINQFLKLLHHRNISSFLVTNAQFPEEIR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatactcctgcagacacctgggacaatctccatgctcacttaactttcctgtggctg
aaccgattttacctctattcatgtgcagcttttggaatcagcctttggttttgcttccag
ttcctcaacaaagccaaagagcagaacaaaaatcgccttgcagaatttagaattcctaaa
atcacagctgctgaaaaagaacagcaagatccaagccttcagaaagtccatgtagctgga
gtgaaggtattctatggttcccagactggaacagcaaagcggtttgcactggtacttact
gaagctgttgcctccattaatttgccagcagaaattattaacatggaagattacgatccg
gatgactctctcatagatgagataagcagccagaatatctgcgtgtttttagttgccact
tacactgatggcaaaccaacggcgaatgcagcctggttctgcaagtggctggaagagacg
gccaatgacttcagagttggcaaagcatatctgaagggcttgcgatacgctgtcttcggt
ttgggaaattcagtgtatgctgaccacttcaacactgtgagcaggaaccttgacaagtgg
ctgtggatgctgggtgctcgacgcattctgtcatgtgctctaggggacagcaatgtggtg
aagagccagcatggaagcattgaggctgattttgaggcttggaaggccaagttgctcacg
aggcttcaagctcttgccaaaggggaccagaaggcctgtagtgggagatgcaaaaaaggg
caatgtagatccaaatcaaaagggagccaagaagcaaaagaacaagagacctcaaaacat
ggggggaaagaagtaagtggagaggactggtgcgtagcattatttcttaattatacagtt
ctatttttcagacaccatacaaatcctgttggcacagagtggcgatggaagatggaccgg
ccagagatgatcttgcaggaggccattgagaaccatcagaatttgatcaagcagtttaaa
ggagtccccggcgtgagagatgaccgcttcagagaagggatggaggccaagcattgtgca
ctgtctcttgttggggagccaatcatgtatccccagatcaaccagttcctgaagctgctg
caccatcgcaacatttcaagttttttggttacaaatgcacagtttccagaggaaattagg
tga
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