Thamnophis sirtalis (common garter snake): 106542504
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Entry
106542504 CDS
T06107
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106542504 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106542504 (CLASP1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106542504 (CLASP1)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106542504 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
HEAT_2
Sec7-like_HUS
Cnd1
Adaptin_N
RTP1_C1
PDS5
Dopey_N
ParcG
MMS19_N
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
106542504
NCBI-ProteinID:
XP_013913732
UniProt:
A0A6I9XII4
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MEPTMESCLMQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGLDILSALVTRLQDRFKAQIGTVLPSLIDRLGDSKDSVREQDQALLLKIME
QAASPQYVWDRILGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNIIFTKFDEVQKSGTMIQGAGDKH
FDDDDSVDGNRPSSASSSTSSKAPSLSRKCGTGTARRVGAVALVAKTPATKEGAGAIDEE
DFIKAFEDVPTVQIYSSRDFEESINKIREILSDDKHDWEQRVAALKKIRSLLLAGAAEYD
TFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPIITSNCFSKSVAVRRRCFEFLDLVLQEWQTHSL
ERHVSVLAETIKKGIHDADSEARIKARKCYWSFHNHFSREAEHLFNSLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSTKRSPTGSTTSRASGISVKSASTSGSLQRSRS
DIDVNAAASAKSKVTSSGSDSPFSSAAALPPGSYASLDGTTSKAEGRIRTRRQSSGSTSS
ITSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSAYGGLSSGTTRGHPVP
TPSSSTDKRSKVPRSQGCSRETSPSRIALARSSRIPRPSVSQGCSRDTSRESSRDTSPAR
GFPPLASRRHSRSTSALSTADSVGQSERFGLGQPGRLPASMNAMRVLSTSTDLETAVADA
LLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAE
VLNHCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLE
TLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNIL
MRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSEAKLAVSKIITWTTEPKSSDV
RKTMHSWVGEDMPAKPAAASSGPGEGNLEEKCKQAAQIVLISLFELNTPEFTMLLGALPK
TFQDGATRLLHNHLKNSSNTNVGSPSNTVGRTPSRHPSSRTSPLTSPTNCSHGGLSPSRF
WGWSADGLSKHPPPLFQPNSIPAAPSHKTFRRSYSPSMLDYDTENLNSDEIYSSLRGVTE
AIEKFSFRSQEDLNEPIKRDGKKDSDIVSRDDGIASPATDVRGSSDVVEGGRMALDNKTS
LLNTQPPRAFSGPRAREYNPYPYSDTISAYDKTALKEAVFDDDMDQLRDVPIDHSDLVAD
LLKELSNHNERVEERKGALLELLKITREDNLGVWEEHFKTILLLLLETLGDKDHSIRALA
LRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKV
LCPIIQTADYPINLAAIKMQTKVIERISKESLHQLLQDIIPGLLQGYDNTESSVRKASVF
CLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacaatggagtcctgcttgatgcaggtcctgcagaaagatgttgggaaacga
cttcaagttggccaagaattgatagattatttctcagataaacagaaatctgctgacctt
gaacacgatcagaccatgctggacaaaatggttgatggccttgctacctcatgggtaaat
tccagcaattataaggttgtcctgctgggtttggacatcttatctgcactggtgacacgg
ctccaagatagatttaaagctcaaattggcacagtgttacctagtttaattgacagactg
ggagattcaaaagactctgtacgagaacaggaccaggccctgctgttaaaaatcatggag
caagctgctagtccccagtacgtatgggacagaattttgggaggattcaaacacaagaat
ttccggacaagagaaggaatttgcctctgccttattgcaactcttaatgcatctggagct
cagagtttaaccttgagcaagattgtgccccatatatgtaacttacttggtgatccaaac
agccaggttcgtgatgcagcaataaatagccttgtagaaatctacagacatgtaggtgaa
cgtgtaagagctgatctcagcaaaaagggattgccacagtctcggctgaacatcattttt
acaaaatttgatgaagtccagaaatcaggcaccatgattcagggagctggtgataaacat
tttgatgatgatgactcggtggatgggaaccgaccatcctcagccagttcctcaacctct
tcaaaggctccctcattatctcgaaaatgtgggacgggcactgctcgaagggtaggagca
gtagctttagtcgcaaaaactccagcaactaaagaaggagctggtgccattgatgaggaa
gatttcattaaagcttttgaagatgtcccaactgttcagatttattctagccgagacttt
gaagaatccataaacaaaatcagagaaatcttgtctgatgataaacatgattgggaacag
agagtagctgcactgaaaaaaatccggtctttattattggctggagctgctgagtatgat
accttcttccaacatctacgcttgcttgatggagccttcaaattatctgctaaagacttg
aggtcccaggtagtgcgagaagcttgtatcacattaggacatttgtcatcggtattgggt
aacaagtttgaccatggggcagaagccatcatgccaacaatctttaatctcattcccaac
agtgccaaaatcatggccacttctggtgtagtagctgtgagattaattattcgacataca
cacatccctagactaattcccatcatcaccagtaactgtttctccaaatcagttgcagtg
agaaggcggtgttttgaatttttagatttagttttgcaggaatggcagacacactccctg
gaaagacatgtatcagtattggctgaaaccatcaagaaaggaattcatgatgctgactcc
gaagcacggataaaagccagaaagtgttactggagcttccacaatcattttagccgagaa
gcggaacatttgtttaattcactggaatcctcataccaaaaagccctgcaatctcacttg
aagaattctgatagcatagtgtctctgcctcagtcagatcgctcctcttctagttcccag
gagagtctcaaccgtccattgtctaccaaaagaagcccaactggaagcactacttcacga
gcttctggaattagtgtgaaatctgcgtcaacatcagggtctctccagcgttctcgcagt
gacattgatgtgaatgcagcagccagtgccaaatccaaagtaacatcttctggttcagat
tcccccttcagttctgctgcagccctacctccaggctcatatgcatctcttgatggtact
accagtaaagctgagggtcgaattcgcacaaggaggcaaagctctggaagcaccagtagt
atcacttcaacacctgctgacactcgaggccgcagtcgggctaaagtagtttcgcaatct
cagcgatccagatcagctaaccctgcaggtgctggtagtcgatccagctctcctgggaag
ctgttgggaagtgcatatggagggcttagcagcggaacaactagaggacacccagtgcca
acaccatcctcatctactgacaaacgcagtaaagtcccccgaagtcagggctgcagccga
gagaccagccctagcaggatagctctagcacggagcagccgtatcccccgacccagcgtg
agtcaggggtgcagccgcgataccagccgtgagagcagccgagatacaagccctgctcgg
ggctttcctccacttgcctctcgacgtcattccagatccactagtgctctctccactgct
gattctgttgggcagtcagaacggtttgggcttggccagccaggcaggttgcctgcctct
atgaatgcaatgcgagttctgagtacaagcacagatctggaaactgctgtggcagatgca
ttgctcttaggagactccagaagcaagaaaaaaccagtgagaagaaggtatgaaccatat
gggatgtattccgatgatgatgcaaacagtgatgcctccagtgcttgctcagagcggtcc
tatggttcccgcaatggaggcatcccacactacctgcgacagacagaagatgtagcggag
gttttaaaccactgtgctagttccaactggtctgaaaggaaagagggattaattggcttg
caaaacctattgaagagccagaggacattaagccgtgtggagttgaaaaggttatgtgaa
atcttcacacgtatgtttgcagacccccacagcaagagagttttcagcatgtttcttgaa
actttggtagacttcatcattattcacaaggatgatttgcaggactggctctttgttctt
ctgacacagttactgaagaagatgggtgctgacctgctgggatccgtgcaggccaaagtg
cagaaagctctggatgtaacaagagattcttttccatttgaccaacaatttaatattttg
atgaggtttatcgtagatcagacccaaacaccaaaccttaaggtaaaagtggcaatatta
aaatacattgaatccttggctagacaaatggatcctacagattttgtaaactccagtgag
gctaaacttgctgtttctaagattattacctggacaacagaaccaaagagctcagatgta
agaaagaccatgcatagttgggtaggtgaggatatgccagctaaaccagcagcagcctcg
tcaggtcctggtgaaggaaacttggaagaaaagtgtaaacaggcagcacaaatagtcctg
atctctctgttcgaattgaacactcctgagtttaccatgttacttggtgccttgccaaaa
acattccaggatggtgctaccagattattacataaccacctcaagaactccagcaacact
aatgtgggttcccctagtaatactgttggccggaccccttcacgtcatcctagcagcaga
accagccctttaacttcacctaccaattgttctcatggaggattatcacccagtcgtttc
tggggttggagtgcagatgggctgtcgaagcacccccctcccctttttcagcctaactcc
atccccgctgctccttctcacaagactttcaggcgctcatactctcccagcatgctggat
tatgacacggaaaacctaaattctgatgaaatttatagttctcttcgtggagtcacagaa
gctatagaaaaatttagttttcgtagccaagaggatctaaatgagccaatcaaacgtgat
ggaaagaaggacagtgatattgtttccagagatgatggtatagcctcaccagccactgat
gtgcgtggaagcagtgatgtggtagaaggaggaaggatggctctggataacaagacttct
ctgctcaacacccagcccccacgtgccttttctggaccccgagctcgagagtacaaccct
tacccctactctgatactatcagcgcctacgataaaactgctcttaaggaagccgtattt
gatgatgatatggatcaacttcgggatgtgcccattgatcattcggacttggtggctgat
cttttaaaagaattatccaatcataatgaacgggtagaagaacggaaaggagcccttctt
gagttattgaaaattacaagagaagataatctgggagtttgggaggaacattttaagaca
attttgctcttattacttgaaacacttggagataaagatcattcaatacgagccttggca
ttgagagttttgcgagaaattctgaggaaccaaccagcaagatttaagaattatgctgaa
ctaactatcatgaagaccctagaagcgcataaagattctcataaagaggttgtgagagct
gccgaggaagctgcttccactctggctagttccatccatccagaacagtgcatcaaagtg
ctttgtcccatcattcaaacagctgactatccaattaatctggctgctattaaaatgcaa
actaaagtcattgaaagaatctcaaaggagtcattgcaccagctcctacaagacatcatc
cctggattgttgcagggttatgacaacaccgaaagcagtgttcgcaaagccagtgtgttt
tgcctcgtggccatctattcagtgattggcgaagaactgaagcctcatcttgcacaactg
actgggagcaagatgaagctcttgaatttgtatataaagagagcgcagacgaccaacagc
aacagcagctcatcctcagatgtttctacacacagttaa
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integrated database retrieval system
