Thamnophis sirtalis (common garter snake): 106542518
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Entry
106542518 CDS
T06107
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A
KO
K16482
centriolar protein POC1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106542518 (POC1A)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106542518 (POC1A)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106542518 (POC1A)
Cilium and associated proteins [BR:
tsr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106542518 (POC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Ge1_WD40
PROPPIN
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
106542518
NCBI-ProteinID:
XP_013913768
UniProt:
A0A6I9XSW3
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MAFPCLEDPTLERNFKGHRDAITSVDFSLNKKQLVSGSMDSCLMIWSMKPQMRAYRFVGH
KDAVMSVNFSPSGHLIASGSRDKTVRLWVPSVKGESTSFKAHTATVRSVHFSNDGQSLVT
ASDDKTIKVWAVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSSSDDKTVKLWDKASRECI
HSFCEHGGFVPHVDFHPSGTSIASAGTDNTVKVWDVRMNRLLQHYQVHSASVNCLSFHSS
GNYLITASNDSTLKILDLLEGRLLYTLHGHQGPASCVSFSRTGDLFASGGFDEQVMVWKT
NFDAADNGDTIQAQKYTMNANANAGDYGNNLKTQNSIMHMNDCFNGMKPMDTGYSEQQKA
GNYRHEKQLGLDSGDFPVRPKTQEAGTAELVQRQQVQIDEIGLTSTLQHIVGQLDVLTQT
VSILEQRLTLTEDKLKECLENQQKITQRKTT
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccttcccttgcctggaagacccaactttggagaggaatttcaaaggccaccgggat
gcaataactagtgtggatttcagtctaaataagaaacagctagtaagtggatctatggat
tcttgtttgatgatctggagtatgaaacctcagatgagggcctatcgctttgtaggtcac
aaagatgcagtaatgtctgttaatttttcaccatctggccatctgattgcttccggttct
agagataaaacagttcgtttatgggttccaagtgtcaagggagaatcgacttcattcaag
gctcatacagcaaccgtcagaagcgttcacttttctaacgacggccagtcattggttaca
gcctctgatgacaaaacaatcaaagtatgggctgtccacagacaaaaattcttattttcc
ctgaatcagcacataaactgggttcgttgtgctaaattttctcctgatggaagattgatt
gtatcatccagtgatgacaaaacagtcaaactttgggataaagcaagccgagaatgtata
cattctttttgtgagcatggtgggtttgtcccacatgtggactttcatcccagtggtaca
tccattgcttcagctggcactgacaacacagtgaaagtatgggacgttaggatgaacagg
ctgctgcaacattatcaagttcatagtgcttcagtgaattgcctgtcctttcactcctct
ggaaactacctcattactgcttctaatgattcaacactaaaaatattggatttattagaa
ggcaggctattgtataccttacatggtcatcagggaccagcttcctgtgtttctttttca
agaacaggagatttgtttgcgtctggaggctttgatgagcaggtaatggtttggaagaca
aactttgatgctgctgataatggtgatacaatacaagcccagaaatatactatgaatgca
aatgcaaatgctggtgattatggtaataatctgaaaacacagaactccattatgcatatg
aatgactgttttaacggtatgaaaccaatggatactggctatagtgagcaacaaaaagct
ggaaattacagacatgaaaagcaactggggctagactctggagatttcccagttaggcca
aaaactcaagaagccggaacggcagaattagtccaaagacagcaagtacagattgatgaa
attgggcttaccagtactctccagcacatcgtgggacagttggatgttctcactcagact
gtatccattctagaacaaaggttgacattaacagaagacaaactgaaggagtgtcttgag
aatcaacaaaaaattactcagagaaaaactacctga
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integrated database retrieval system
