Thamnophis sirtalis (common garter snake): 106545939
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Entry
106545939 CDS
T06107
Symbol
CHPF
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tsr01100
Metabolic pathways
Module
tsr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
106545939 (CHPF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsr01003
]
106545939 (CHPF)
Enzymes [BR:
tsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
106545939 (CHPF)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
106545939 (CHPF)
Glycosyltransferases [BR:
tsr01003
]
Glycan extension
O-Glycan
106545939 (CHPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
106545939
NCBI-ProteinID:
XP_013918141
UniProt:
A0A6I9XWI9
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MRFSSLLSLLRPVGPVVVGVSLGFTLSLLSVTWVEEPCGPGHGSFREGGLEQHQHPGGQG
NAARKPNSLSGGLGTEPEQSWEPRVLPYKPLNPGKATKKTIRTRYISTELGMRQRLFVGV
LTSKNTLNSLAVAVNRTLGHRLERLIYFTGTRGRKVPHGMMVVTHGDERPIWNMYQTVKY
VIDHYLSDFDWVFLVQDDTYVEAHRVNHLASHLSIDTLLYMGRPEEFIGGDTQGHYCYGG
FGYLLSRALLLRLQPHLESCRNDILSARPDEWLGRCIIDYTGVDCVAEQEGLRYHYFELG
KNTDPEKESDPQFNAAFTVHPVLDPLQMYRLHRHFARVELEHTYQEIQQLQLEIQNASSL
SADGELSSTWPIGIPPPFQPKTRFEVLHWDYFTEEAAFSCVDGAPKCELQGSDAADVADV
VAAAVEELNRRYQPLLHVRKQQLLNGYRRFDPTRGMEYTLDLQLEVVTQKGHSRSLVKRV
HLLRPLSEVEIIPMPYVTEASRVNVILPLTASEKDYATHFLDVYAAAAFENSENAVLTFL
FIYDPFEAQKVAQNDVFGGVKAHITEYERRHPQVKIPWISVKTDVPSQIKVMDIISKKHP
VDTLFFVAGVSTEVTTEFLNRCRMNTINSWQVFFPIHFQGYNPTIAFHNQPPPLSGLDLV
RDAGHFDREVFNEACFYNADYMAARTRMAADAQDNEDLLETMDIYDLFVKYSNLHVFRAV
EPALLQPFRPQICNPRLSEEQYHRCVQSSLEGLGSRSQLAMVLFEQEQGNST
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttctcttccctcctgtcgctcctgcgtcccgtggggcctgtggtggtcggggtg
tcccttggtttcacgcttagcctgctcagtgtgacctgggtggaggagccctgtgggccc
ggccatggcagcttccgtgaagggggcctggagcagcatcagcatccaggagggcagggc
aacgccgcccgcaaacccaactctctctccggagggctaggtacggagcccgagcagagc
tgggagccccgcgtcctgccctacaagcctctgaacccagggaaggcgaccaaaaagacc
atcaggacccgatatatcagcacagagctgggtatgcggcagcgtctctttgtgggtgtg
ctgacctcaaagaacacgttgaactcgctggccgtggcagtgaatcgtaccctcggccac
cggctggagcgcctgatctacttcacaggcacccgggggcgcaaggtgccccatggcatg
atggtggtgacgcatggagatgagaggcccatatggaacatgtaccagactgtcaaatac
gtgatagaccattacctgtctgactttgattgggtgttcctggtgcaggatgatacctac
gtcgaagcccatcgggtgaaccacttggcctctcacctcagcatcgacactctgctctac
atgggccgacccgaggagttcattggtggggacactcagggacactactgctacgggggc
tttggttacctgctttcccgagctttgctcctgcgtttgcagcctcacttggaaagttgc
cggaacgatatcttgagcgcacgccctgatgagtggctgggccgctgtatcatcgactac
acgggagtagactgcgtggcggagcaggagggcttacgttaccattactttgagcttggg
aagaacacagaccccgagaaggaaagtgatccgcaattcaatgctgcattcactgttcac
ccagtgctggaccctctccagatgtatcggctgcacagacattttgctcgtgtagagctg
gagcacacctatcaagagatccagcagctacagctggagatccagaatgccagcagcctt
tctgcagatggggagctgagtagcacgtggcctatcggcattcctccacctttccagcca
aagacccgttttgaggtgcttcactgggattatttcactgaagaggcggctttttcctgt
gtggatggggcccccaagtgtgagctccaggggtcagacgcagcagacgtagctgacgtg
gttgctgcggccgtggaagagctgaaccgccgataccagccgttgctacatgtgcgcaag
cagcaactcctgaatggctaccgtcgttttgatcctacccggggcatggaatacaccttg
gatctgcagttggaggtcgtgacccagaaggggcacagccgttccttggtcaaacgggtg
cacctcctgcgccctcttagtgaggtggagattatccccatgccctatgtaacagaagcc
agccgtgtcaatgtcatcttgcccctgactgcctcagaaaaagactacgccacccatttc
cttgacgtctacgctgcagcagcctttgaaaactccgaaaatgccgtgttgaccttcctc
ttcatctatgatccttttgaagcccagaaggtggctcagaatgatgtttttgggggcgtg
aaagcacacatcacagagtacgagcggcgccaccctcaggtgaagattccttggattagt
gtaaagacggacgtgccctcccagattaaggtgatggacatcatctcaaagaagcatccg
gtagacacgctcttctttgtggccggagtgagcactgaagtcaccactgagttcctcaac
cggtgccgcatgaacaccatcaacagctggcaggtcttcttccccatccatttccagggc
tacaaccccacaattgctttccacaaccaacctcccccactttctggcttagaccttgtg
cgcgacgctggccattttgatcgcgaggttttcaatgaggcttgcttctacaacgctgac
tatatggcggcacgcacccggatggcagctgacgcccaggacaatgaggacctcctggag
accatggacatctatgaccttttcgtcaaatattccaatctgcacgtcttccgtgcggtt
gagcctgccctcctgcagcccttcaggccccagatctgcaatccccggctgagcgaggag
cagtatcatcgttgtgtgcagagcagcttggagggcctgggctcccggtcccaactggcc
atggtgctcttcgagcaggagcagggcaacagcacatga
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