Thamnophis sirtalis (common garter snake): 106546407
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Entry
106546407 CDS
T06107
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106546407 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106546407 (NUP210)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106546407 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_2
Motif
Other DBs
NCBI-GeneID:
106546407
NCBI-ProteinID:
XP_013918752
UniProt:
A0A6I9XX61
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search
MPSDQYELQLQNNTLSSGGDTAWPIARLDQATCTVTALQRGQANLVLSHKSVSMQGASKL
PNGTLFVVDPGYLGFSIHPGERWVLETERFYEITIEVYDKSSNKVYLSENIRIDVYFPKE
YFEVMRSSLNGSYHYVKAIKEGHIVLTAKLTSIVDQDGGVHTFSVPAQNQQEVDIYAPIV
LQPSILTFPWQAKAGAYQYRILAYGGSGNFTWTSSQQNVASITIKGVMTTGNAIGISVIH
ARDVQNPLHHGEMKVYVIEPSDMKFTPCPVEAHVGEILDLPLKIIGVMDKETNEVVTLSD
CSQFDLVVNIENQDVFNPFQGRLQPTPEYCSGIKVKAETQGYSSLVVSYTHDHIHLSASI
TIAAYLPIKIIDPISAALVTLGSSKDILFEGGPRPWIQEPTKFFRDTNTEHPENVGLHLL
GPPTSRNSFQHWARATCKALGDHVISLTIGNKPTVTNPFPAVESVDVTLICATPSQFSLA
LVSTDPEMDVSCPFLHQDKQGVPISIFRNPVLKLDVYDHQGNKFDNFSSLTITWESTDHL
LASVEARMPMELSMKDHGNSQKKMQGLQTVLVHHKPGATIISATAVGYQHIHLINNEVKK
PYEALLPVSAGIELILVKDVKMSPKEVTIYNHQAVKAELIINGGSGYFFINTSVVDIVKI
VYEEGKDIALIYPLYPGSVSVMIHDLCLASSTIAKTDVYVSNIQEVYVGIVDKVEIGKNV
KAYVRVLDASKKYFHSKNFKFMDLTLKAASQIISLKALGETPDEYTAVFLVQGMAIGQTS
VTGVVTDRYGEKIYSVPQQIEVFPPFKLIPKKVTLLIGAVIQITSEGGPQPQFNIIFSIH
DPSIASVNNSGFITGKAVGNSTILGMVQAVHTEAGKVVVASQDKVEVEVIQLEAVRIHAP
ITRMKTGTQMPVYVMGIAGNQTPFSFGNAVPGLRFYWSVTTRDILDVKSRFNEASLQLSA
ENNFAVDVYGKGKGKTGLKVVVKVLDPSAGQFSHMAKELTDEIQIQVFEKLVLLGIDLGQ
ILMSTNSFFKVQTNRDGAASLTYRVLDSQDKAPVVEIDESGYLSSHSHIGLSTIEIISQE
SFGINQTLVVAVKVAPISYLRISMNPIFHTKNHEPLLALPLGITLSLTIHFHDNYGDTFH
SQNSMLHFAVNRDDFLQVGKGATNNTLVLRTMNIGLSLLKVWDAEHNIADYVPLPVQHAI
SAELIDVIVGDVICLTSSLVNQDGLTGTWSSSSDSILQIDSKAGVAVARNSGSVIIYYDV
SGLCKTYREVLINEPKKIVVTHVSEMKTNLQDTSKVILQIGARSKNLKGECSSAQIEVIE
KMKPQSMINCQLNFNNNVFDFQASEIVAAEPMFDTALGQYTCSIRILRLADKQLKQLTMS
KTAITITPSLQGSHSLEQISTEVPFNPGFYANQTEFILTNHYTSSDVKIFGAAEVLKNLE
VRSSSPLMVVFEKDRSYGLPSYVIYTVSLSDPEIASKTNLNAVLTISSPMTDQSLAIPVT
VTYVSDRTLPMKYNTSLFQHFLDSYQVIFFTAFALLAGMAVMIIVHYTLLSSNEQQIHPA
FITKTSPQRPHTGSPVTPTAPFSPVSSSPQKSSPNRLWSPPYSSQ
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgatcagtatgagctacaacttcagaacaacacactcagctctgggggagat
accgcctggccaattgccagattggatcaggccacatgcacagttactgcattgcagcgg
ggacaggcaaatcttgtactttcccacaaaagtgtatctatgcaaggggcttctaaatta
ccaaatggcaccctttttgttgtggacccaggatacttaggattttcaattcatcctggt
gagagatgggtgctggaaactgagaggttctatgaaatcactattgaagtgtatgacaaa
tcaagcaataaggtgtatttatctgagaacatcagaattgatgtgtacttcccaaaagaa
tattttgaagttatgaggtcctctctgaatggttcatatcactatgtaaaagcaataaaa
gaagggcatatcgttcttactgctaaactaacatctattgtagatcaggatggaggtgtt
cacacattttctgtccctgcacaaaatcaacaagaagtagatatctatgctcccattgtt
cttcaaccaagcattttgacctttccatggcaagcaaaagcaggagcctatcaatacaga
atcctggcttatggtgggagtggaaattttacttggacctcatctcagcaaaatgttgct
tcaattacaattaaaggagtaatgacaactgggaatgcaatcggtatcagtgtcatccat
gccagagatgttcagaatcctttacaccatggggaaatgaaggtctatgtgatagaaccc
agtgatatgaaattcacaccttgtccagttgaagcacatgtgggagagatcctggatctg
cctctgaagattattggtgtaatggacaaggaaaccaatgaggtggtcactctaagtgac
tgctcacaatttgatttagttgtcaacattgaaaatcaggatgtgttcaatccatttcaa
gggagacttcagccaactcctgaatactgcagtgggatcaaagttaaagctgaaacccaa
gggtattcctcactagttgttagttatacccatgaccatattcacctcagtgccagtatt
accatagcagcctatctgccaataaaaattattgatcctatttctgctgctttggtaact
ttgggttcttctaaagatatcctctttgaaggtggacccagaccatggattcaagagcca
actaagttcttcagagataccaatacggaacatccagagaatgttggcttacatttacta
ggaccacctacatctaggaattctttccagcattgggctagagcaacttgcaaagctctc
ggggatcatgtaatttccctaacaataggcaacaagcccactgtaacgaacccttttcca
gctgttgagtcagttgatgtgactttgatttgtgccactccttctcagttttccttggca
cttgtatctacagatcctgaaatggatgtttcctgtccctttcttcatcaggacaaacaa
ggggtccctatttcaattttccgcaacccagtattgaagctagatgtttatgatcatcag
gggaataaatttgacaattttagttctcttactataacctgggaatcaacagaccattta
ctagctagcgtagaggccaggatgcccatggaactgtctatgaaagatcatggaaacagt
caaaagaaaatgcaaggtctgcaaaccgttttagttcatcataaaccaggagcaacaata
atatcagctactgcagttggctatcagcatattcatttgattaataatgaagtaaagaaa
ccgtatgaagctcttttacctgtaagtgcaggtattgaactaatacttgtgaaagatgtt
aaaatgagtcctaaagaagtgactatttataatcatcaggcagttaaggccgaactgatt
attaatgggggatctggatatttttttattaataccagtgttgttgacattgttaaaata
gtatatgaagaaggtaaagacattgctctgatatatcccttatatccagggtcagtatct
gtaatgatacatgacttgtgccttgcctcttccaccattgctaaaactgacgtatatgtt
tctaatatacaagaagtatatgttggaattgttgataaggtagaaattggcaaaaatgtt
aaagcctatgtcagagtgctggatgcttccaagaaatattttcacagtaaaaacttcaaa
ttcatggacttaactctaaaagcagcatctcagattatttccttaaaagcccttggtgaa
actcctgatgaatacacagctgtttttcttgtgcaaggcatggccataggtcaaaccagt
gttacaggagttgtcactgacagatatggtgaaaagatctattcagttccacagcagatt
gaagtatttcctccttttaaattgataccaaaaaaagtcactctactcataggtgcagtg
attcaaattacttctgagggagggccgcagcctcagttcaacataatcttttccatccac
gatcccagcattgcttccgtaaacaacagtggctttataactggcaaagctgtgggcaac
agtaccatactgggaatggttcaagcagttcacacagaagctggcaaggttgtggttgca
tcccaggataaagttgaagttgaggtaattcagcttgaagctgtcagaatccatgctcct
attactcgaatgaaaactggaactcagatgccggtatatgtgatgggcattgctggcaat
cagacccctttttcatttggaaatgcggtgccaggcttaaggttttattggtctgtcact
acgagggatatcttggatgtcaagtcaagattcaatgaggcttcccttcagctttcggcg
gaaaataattttgcggtggatgtttatggcaaagggaaagggaaaacagggctgaaggtt
gttgtgaaagtccttgatccttcagctggacagttctctcacatggcaaaagaattgaca
gatgaaattcaaatacaggtatttgagaaactagttcttctgggaatagatttagggcag
atattaatgtcaacaaactccttttttaaagttcaaacaaacagggatggagcggcttct
ctaacttaccgtgtactggatagtcaagacaaggctcctgtggtagaaattgatgaaagt
ggttatcttagttctcattctcacattggactatcaacaatagaaataatttcccaagaa
tcatttggaatcaaccagacacttgttgtcgctgtcaaggtagctcctatttcctacctg
agaatatccatgaacccaattttccatacaaaaaatcatgaacctttactggcattacca
ttgggcatcactttgagtttgactatccacttccatgacaattatggtgatactttccat
tcacaaaattccatgcttcactttgcagtcaacagagatgattttttacaggttgggaaa
ggggccactaacaatactttggtacttcgaacaatgaacattggactaagtttgcttaag
gtttgggatgcagaacacaatattgcagactatgtccctcttcctgtccaacatgccatc
tccgctgagctcatcgatgttattgtaggagatgtcatatgtttaacctcctcactggta
aaccaagatggtttaacaggaacatggagttcttcttcagacagtatccttcagattgat
tcaaaagctggagtggctgtagcaaggaactctggaagtgttataatatattatgacgta
tctgggttgtgtaagacatatagagaggtgttaattaacgaacctaaaaagattgtggta
acacatgtaagtgaaatgaaaacaaatcttcaggatacttcaaaagttatacttcaaatt
ggagctagaagtaaaaatttgaaaggagaatgttcaagtgcccaaattgaagtaattgaa
aaaatgaaaccccaatctatgatcaattgtcagcttaatttcaacaacaatgtatttgat
ttccaagcttctgaaattgttgcagctgaacccatgtttgatacagctttaggacagtat
acttgttccatcagaatactcagactagccgacaagcagctaaagcaactcaccatgagc
aaaactgccatcaccatcacaccttctctccaaggcagccattccttagagcaaattagc
actgaagtgccatttaatccaggattctatgctaatcaaactgaatttatcctaactaat
cattacacaagttctgacgtgaagatctttggagctgctgaagttcttaaaaatcttgaa
gtgagatccagctcacctctgatggtagtttttgagaaagacagatcctatggcttgcct
agttatgttatctacactgtgagtttatcagacccagaaattgcaagtaaaacaaattta
aatgctgtacttactatatccagcccgatgacggaccagtctcttgctatccctgtgaca
gttacttacgtgtctgacagaactctgccaatgaaatataatacaagtttattccaacac
tttcttgattcctatcaagttattttttttacggcttttgcacttttggctggaatggct
gttatgattatagtgcactatactcttttgtcgtcaaacgaacagcaaatacatccagct
tttatcacaaagactagtcctcaaagaccacatactggatctcctgttactcctacagct
cccttcagccctgtatcttcaagtcctcaaaagagttctcctaacagattatggagtccg
ccatattcttcacaatga
DBGET
integrated database retrieval system
