Thamnophis sirtalis (common garter snake): 106546672
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Entry
106546672 CDS
T06107
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106546672 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106546672 (USP47)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106546672 (USP47)
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106546672 (USP47)
Ubiquitin system [BR:
tsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106546672 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
106546672
NCBI-ProteinID:
XP_013919076
UniProt:
A0A6I9XYY8
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MHPVKQIMMENKLEVHKDKTLKEAVEIAYKIMDLEEAVPLNCCRLVKYDEFHDYLERSYE
GEDDTAMGILLGGVKSTYMFDLLLETRQPDQSFQCYKPGEVMVKVHVVDLKQDTVAPPIS
VRAYLNQTVTEFKYLISKAVHLPAETMRVVLERCYNDLRLLSVANKTLKAEGFFRSNKVF
VESSDSQDRQLPFTDSQLWKLLDRHANTIRLYVSLPEQSPGSLFRRTIFQKQQQQEGDNG
DSSRSTEASDFENIESPSNEADSSASTENQELENQIQVSDTDNFQSEERSDSDLNNDRST
SSVDSDILSSSHSSDTLCNVDNTAISLANGLDSHSITSSRRSKANEGKKETWDTAEEDSG
TDSEYDESGKSRAEAQFMYFKAEPYITEEGSGEGQKWLLIHVDKRITLSAFKQLLEPFVG
VPSSQFKVFRIYASNQEFESVRLNETLSSFSDDNKITIRFGRALKKGEYRVKVYQLLVND
PEPCKFLIDSVFAKGMTVRQSKEELLPQLREQCGLNLTIDRFRLRKKTWKNPGTVFLDYH
VYEEDINISSNWEVFLEILEEAEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESSSVDE
LKDKLCTISGIDAENIEFAKGRGTFPCEISVLEIHQDLDWNPKVSTLNVWPLYICDDGAV
IFYRDKTEEMVELTEEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQ
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagtaaaacaaataatgatggaaaataaactggaagttcataaagataagact
ctgaaggaagctgtggagatagcttataagataatggatttagaagaagcagttcctttg
aattgctgtcgtcttgttaaatatgatgagttccatgattatctggaacgatcctatgaa
ggagaagatgacactgcaatgggaatcttgcttggtggtgttaaatcaacctacatgttt
gatcttcttctggaaaccaggcaacctgatcagtctttccaatgttacaaacctggtgaa
gtcatggtaaaggttcatgttgttgacctaaaacaggacacagtggctcctccaattagt
gtccgtgcttatttgaaccaaacagttacagaattcaagtatctcatttcaaaggctgta
catttacctgctgaaacaatgcgtgttgttttggaacgttgctataatgatttgcgtctt
cttagtgtggctaacaaaacacttaaagctgaaggcttttttaggagcaataaagtattt
gttgaaagttcagattctcaagatagacagctgccatttacagattcacagttatggaaa
ctcctagatcgccatgcaaatacaatcagactgtatgtttcattgccggaacagtctcct
ggatcactgttcagaaggacaatatttcaaaagcaacagcagcaggaaggagataatggc
gacagcagcaggagtacagaggccagtgactttgaaaatatcgaatcgccttccaatgag
gcagattcatcagcatcaacagaaaaccaggaacttgaaaaccaaatacaggtttctgac
acagataatttccagtcagaggagcggtcagattccgatttgaacaatgacaggagcaca
agttcagtggacagtgatattcttagttccagccacagcagtgacacgttatgcaatgtc
gataacactgctatatccttggcgaacggacttgattcacacagcataacaagcagtagg
cgatccaaagccaacgaagggaaaaaggaaacttgggatacggccgaagaggattctgga
accgacagtgaatatgatgaaagtgggaaaagcagggcagaagcccagtttatgtacttc
aaggcagagccctacatcacagaagaaggttcaggagaggggcagaaatggttgttgatt
catgttgataaaagaattacactctctgccttcaaacaactcttggagccatttgttgga
gttccatcttctcagtttaaggtctttcgaatttatgccagcaatcaagaattcgagagt
gtccggttgaatgagactctttcctccttctcagatgataacaagataactatcaggttt
ggaagagcacttaagaaaggggaatacagagtcaaggtttaccaacttttggtgaatgat
ccagagccctgcaagtttcttatagattcagtttttgctaagggaatgactgtgcggcaa
tcaaaagaggagttacttcctcagctcagggagcaatgtgggctgaatttgactatcgac
agattccgcctaagaaagaagacttggaaaaacccagggactgtgtttctggattatcat
gtctatgaagaagatattaatatttcaagtaactgggaggttttcctagaaatacttgaa
gaagcagaaaaaatgaaatctatgtcacaacttgctgttctgtcaagaagatggaggcca
tcagagatgaaactggatccttttcaagaagtagttttagagagcagcagtgttgatgaa
ttaaaagataagctttgtacaataagtggaatcgacgcagaaaatattgaatttgcaaag
ggtagagggacatttccatgtgagatctccgttctagagatacatcaagatttagactgg
aatccgaaggtttctaccctgaatgtatggcctctctacatctgtgatgatggagcagta
atattttatagggataaaaccgaagaaatggtggaactaactgaagaacagagaaatgaa
ctcatgaaaaaagaaagcagtagacttcagaaaactggacatcgtgtgacctattcccct
cgtaaagaaaaagcactaaaaatatatcttgatggagcgccaaataaagatttgactcaa
gactga
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