KEGG   Thamnophis sirtalis (common garter snake): 106548162
Entry
106548162         CDS       T06107                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106548162 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tsr01009]
    106548162 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsr03400]
    106548162 (PNKP)
Enzymes [BR:tsr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     106548162 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     106548162 (PNKP)
Protein phosphatases and associated proteins [BR:tsr01009]
 HAD phosphatases
  Other HAD phosphatases
   106548162 (PNKP)
DNA repair and recombination proteins [BR:tsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     106548162 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase Hydrolase_6 Rubrerythrin HAD
Other DBs
NCBI-GeneID: 106548162
NCBI-ProteinID: XP_013920962
UniProt: A0A6I9YAT2
LinkDB
Position
Unknown
AA seq 563 aa
MLTSMQCFLISQDKRHDPVLLPDGVTVVLGRGPETLVTDKKCSRTQVELLANYAYRSVRV
TQRGINPTSVEEIHLHCGDSTTLQEGETLRLVNGLYPYCIRFEQDDNSAKKNPLEFFCSK
QNQQKAEEDGKAPTVKRLKVSCPSEEEDDDDSFITEKLKQLQETAAQAQAHSSQKPVSKL
APHPSDSWEDHGKLLVFTKKGIVSSTKVAGFDLDGTLITTKSGKVFPISPDDWRILYPEV
PHKLKQLQSEGYKLVIFTNQLGIGRGRLRPEIFKAKVEAVIERLGVSLQVFVATHSGMYR
KPVLGMWDYLCKKANGGLEVSLQESVYVGDAAGRPANWAPGQKKKDFSCSDRLFALNAGL
PFYTPEEYFLGWKQAPFALPDFDPRALDPKAELYDPPNASLISSSSELVIAVGFPAAGKS
TFLKRHLVSVGYAYVNQDTLGSWKKCVALCETSLQAGKSVVVDNTNPELESRRRYTECAK
KASVPCRCFLFTASLEQAKHNNRFREMTEKDHVPVNNIVLNTYKSKYVEPSLEEGFSEIL
KINFVPQFTDSKLESLYRQFSEG
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgctcaccagtatgcagtgctttctcatcagtcaagataagcgacatgatccagttctt
ctgcctgatggtgtgactgtagttctaggcaggggtccagaaacccttgtcactgataag
aaatgttcccgaactcaagtggaattgctggcaaattatgcctaccggtcagttcgagtc
acacagcgaggtataaatcccacttctgtggaagagatacacctgcattgtggagacagc
acaacgctccaagaaggagagactctgcgcctggtaaacggactgtatccttattgcatc
cgctttgagcaagatgacaactctgcaaagaagaacccactggaattcttctgcagcaag
cagaatcagcagaaggcagaagaagatggcaaggcccctacagtcaaacgtctcaaggtt
tcctgtccttctgaagaagaggatgatgacgactcatttataactgagaaactgaagcag
ttgcaagagacagcagcacaggcacaggcacactcttctcagaagcctgtttcaaaactg
gccccccacccgtctgattcctgggaggaccatggcaagctattggtcttcaccaaaaaa
ggaatagtatcgagtactaaagtggcagggtttgacctggatggaactcttatcacaaca
aaatctggaaaagtgtttcctataagtcctgatgattggaggatcctgtaccctgaagta
cctcacaagctgaagcaacttcagagtgaaggatacaagcttgtgatctttaccaatcaa
ctgggcattggccgtgggcgtcttaggcctgaaattttcaaagctaaagtggaagctgtg
attgagcgattgggtgtctcgttgcaggtctttgtggcaactcattcaggaatgtaccgc
aaacctgtccttggcatgtgggattatctgtgcaaaaaggcaaatggtggcttagaagtg
tctttgcaagaaagtgtctatgtaggagatgctgctggacgtccagcaaactgggcccct
ggacagaagaagaaagatttttcttgcagtgaccgtctgtttgctttgaatgctggcctt
cccttctacactcctgaagaatatttcctgggttggaaacaggcaccgtttgcactcccc
gactttgatcctcgagcattggaccctaaagctgaactgtatgatccacccaatgcctcc
ttgatctcatcctcctcagagctggttatagctgttggcttccctgctgctggcaaatca
acttttttgaagagacatttagtctcagttggatatgcgtatgtcaaccaggacaccctt
ggttcatggaagaaatgtgtggcattgtgtgaaacatcattgcaagcaggaaagagtgta
gtagtggataataccaacccagaactggaatcgagacgcaggtacactgaatgtgctaag
aaggccagcgttccctgccgctgctttctttttactgcctcactggaacaagccaagcat
aacaacagattccgagagatgacagagaaagaccatgtgccagtcaacaacattgtattg
aatacctataagagtaagtatgtggagccatccctcgaggagggtttctctgaaattctc
aagattaattttgtgcctcagtttacagactccaaattggaatcactttaccggcagttt
tcagaaggataa

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