Thamnophis sirtalis (common garter snake): 106548933
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Entry
106548933 CDS
T06107
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106548933 (DDX4)
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106548933 (DDX4)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106548933 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106548933
NCBI-ProteinID:
XP_013921907
UniProt:
A0A6I9YCP7
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MGDENWDTEFTEDVSREGSRALPVFQPSFQKPGSISMRTNETFCNFTQSIKQPGIRENRN
GEEKQTGGFGSGRIFGNRGNGFEERKSSSFVRGFQRMNDDNSVLRRPGRGSFRGDRGGFG
RFTTDDANMKQDGRQNSVGLGFKRRGFGIPSGEFESRREFEARGDYKESSEEANIMGRNP
KVTYVPPPPPDDENSIFAHYQTGINFDKYDNILVEVSGLDPPPAIMNFEEAGLCETLIKN
IDKVGYFKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLIPILAHMMRDGVTASQFKV
EQEPECIIVAPTRELINQIFLESRKFSYGTCVRPVVIYGGIQMSHTIHQIKQGCNILCAT
PGRLLDIIGRQKIGLSKLKYLVLDEADRMLDMGFGPDIKKLISSPGMPSKDNRQTLMFSA
TFPDEIQRLAGEFLKTDYLFVVVGQVGGACSDVQQTILQVKQYDKKEKLVEILNEIGNVR
TMVFVETKKKADFFATLLCQENISTTSIHGDREQREREEALHYFRTGRCPVLVATSVAAR
GLDIENVQHVINVDLPSTIDEYVHRIGRTGRCGNLGKAISFFDPQADSPIAQPLIKVLAD
AQQEVPAWLEEIACGSGGIGFSNPKGNVFAAVDSRKVFCNKDNHHSGGFAASNILVADES
WD
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgagaactgggatacggagtttacagaagatgttagtagagagggaagccgg
gccttgccggttttccagcccagcttccagaagccgggcagcatatccatgagaacaaat
gaaaccttttgcaatttcactcagagtataaaacagccaggtatcagagaaaaccgtaat
ggtgaagagaaacaaacaggtggatttggaagtggaagaatttttggaaacagaggaaat
gggtttgaagaaagaaaatcttcaagttttgtaagaggttttcaaagaatgaatgatgac
aatagtgttcttcgtagacctggaagaggatcattcagaggtgatagaggaggatttggg
cgatttacaacagatgatgcaaatatgaaacaagatggaagacaaaattctgtcggctta
ggttttaaaagaagaggctttggtattccatcaggtgaatttgaaagtagaagagaattt
gaagccagaggggactacaaagaaagcagtgaagaagcaaatataatgggaagaaatcca
aaggtgacatacgtaccaccaccaccaccagatgatgaaaatagcatctttgcacattac
cagacaggaataaattttgataaatatgataatattcttgtggaagtttcagggcttgat
cctccaccagcaataatgaactttgaagaagctggtctgtgtgaaaccttaataaagaac
atagataaagttggatattttaaacttactcctgtgcagaaatatagtattcctattgtg
ctggcaggacgtgacttaatggcctgtgcacaaacaggatctggaaaaacagcagctttt
cttataccaattttagctcacatgatgcgagatggagtgactgccagtcaattcaaagtg
gaacaagaaccagaatgtataattgtagcaccaactagagaactgataaatcagatcttt
ctggaatcaagaaaattttcatatggaacttgtgtaagacctgttgtgatttatggaggc
atacaaatgagccatacaattcatcagataaagcaaggctgtaatatattgtgtgctacc
ccaggaagacttttggatatcataggcagacaaaagattgggctcagcaaattaaaatat
ttggtgttagatgaagctgatcgtatgttggatatgggatttggccctgatataaagaaa
ttaatttcatctccaggcatgccctcaaaagacaatcgccaaacattaatgtttagtgcc
actttccctgatgaaatccaaaggcttgctggagaatttttgaagacagactacttattt
gttgttgttggacaagtgggaggagcatgcagtgatgttcagcagaccatacttcaagtt
aagcagtatgacaagaaagagaaacttgttgaaattcttaatgaaataggcaatgtacga
actatggtgtttgtggaaacaaagaaaaaagcagatttttttgcaactttactttgccaa
gaaaacatatcaaccacaagtattcatggtgaccgggaacagagggaaagagaagaagca
cttcattattttcgtactggaagatgccctgttcttgttgctacatctgtagcagcaaga
ggtctggatatagaaaatgttcaacatgttataaatgttgatcttccttccacgattgat
gaatatgttcataggattggacgaactggacgttgtggtaatctaggcaaagcaatttct
ttctttgatcctcaagcagatagtcctattgcacagcccttaataaaagtgctcgcagat
gctcagcaagaggttccagcatggttagaagaaattgcttgtggttcaggtgggattggt
tttagtaatccaaagggaaatgtgtttgcagctgttgattcccgaaaggttttctgtaac
aaagacaatcatcacagtggaggatttgcagcatcgaatatacttgtagcagatgagtcc
tgggattaa
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