Thamnophis sirtalis (common garter snake): 106553928
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Entry
106553928 CDS
T06107
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03022
Basal transcription factors
tsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106553928 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
106553928 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106553928 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106553928 (GTF2H4)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106553928 (GTF2H4)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106553928 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
106553928
NCBI-ProteinID:
XP_013927990
UniProt:
A0A6I9YWL1
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MVGSPSAAVSQDLAQLLTEAGLMKSSEPGEPPCITSSGFQFLLLDTSSQLWYFMLQYLQS
AETRGMDLVEILSFLFQLSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYY
PTRLAINLSSGISGTTVDTHNQGFIVVETNYRIYAYTDSELQIALIALFSEMLYRFPNLV
VAQVTRESTQQAIANGITADQIIHFLRTRAHAVMLKQTPVLPPTITDQIRLWELERDRLR
FSEGVLYNQFLSQVDFELLRDHAKELGVLVFENPIKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggtaggctctcctagtgcagcagtgagtcaggacctggctcaactgctgactgaagct
ggcctgatgaagagcagtgagcctggggaacctccctgcatcacatcctctggcttccag
ttcctgttgctggatacttcatcacagctgtggtacttcatgctccagtatctccagtca
gcagagaccaggggcatggacttggtggagattctttccttcctctttcagctcagcttc
tccacacttggcaaggattattctgtggaaggaatgagtgattctcttctgaactttctg
cagcatctccgggaatttggcctggtgtttcaaagaaagagaaaatccagacgttactat
cccacccgcttagctattaatctttcctccggcatctcaggtaccaccgtggacacccat
aaccaaggctttattgtggtggagaccaactacaggatctatgcatacacagattcagaa
ctacagattgcattaattgccctcttctctgagatgctgtatcgcttccctaacttggtg
gtggcgcaagtcacccgggagagcacacagcaggccattgccaacgggatcacggccgat
cagatcattcacttcctacggacacgagctcacgccgtgatgctgaaacagacccctgta
ctgccccccacaatcacagatcagatccggctgtgggaactggaacgggatagactgcgc
ttttctgagggtgtcctatacaaccagttcttatctcaggtggactttgagctgctccgt
gaccatgccaaggaacttggggtcctggtttttgagaacccaatcaagcgtctcatggtg
gtgactcccgccggccactcagacgtcaagcgcttctggaagcgtcagaaacacagttca
tga
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integrated database retrieval system
