Thamnophis sirtalis (common garter snake): 106555107
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Entry
106555107 CDS
T06107
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106555107 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106555107 (SMARCE1)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106555107 (SMARCE1)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106555107 (SMARCE1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106555107 (SMARCE1)
PBAF complex
106555107 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
Sarcoglycan_2
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
106555107
NCBI-ProteinID:
XP_013929360
UniProt:
A0A6I9Z0H1
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MSKRPSYAPPPTPAPTTQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRATASSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPD
DYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEERHQEKKRKFLESTESFNSELKRLCSLKVEVDMEKIAAEIAQAEEQARKRQ
EEREKEAAEQAERNQTTMATEEEQAASKAEEKKEEGTPPMETEEPPPEEAIETQQNGEGT
STPEDKESGQEGVESMAEEGTSDSNTGSESNSALAEEPPADPITSEDGEKKE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgaccatcttatgctccaccacccaccccagcccccacaacccaaatgcca
agcacaccggggtttgtgggatacaatccatacagccatctggcgtacaacaactacagg
ctgggagggaacccgggcaccaacagccgggccacggcatcatcgggtattacaatcccc
aaacccccaaagcctccagataagccactcatgccctacatgaggtacagcaggaaggtc
tgggaccaagtgaaggcatccaaccctgacttgaagttatgggaaattgggaagatcatt
ggagggatgtggcgtgacctcactgatgaagagaagcaagaatacttaaatgaatatgaa
gcagaaaagatagagtacaacgaatcaatgaaggcctatcataattcacctgcttacctt
gcctatatcaatgccaaaagccgtgctgaagctgcactggaggaggaaagccggcaaagg
caatcccgaatggagaaaggtgaaccttatatgagcatccagcctgctgaggatccagat
gattatgatgatggattttctatgaaacatactgctactgcccgtttccagagaaaccat
cgcttaattagtgagatcctgagtgaaagcgtagtccctgatgttagatctgtggttact
acagcaagaatgcaagtcctcaaacgccaagtccagtcattaatggttcatcagcgtaaa
cttgaagctgaactccttcaaattgaagaacgtcatcaagaaaaaaagaggaagtttttg
gaaagcactgaatcctttaacagtgagcttaaacggctctgcagcctgaaagtagaagtg
gacatggagaaaattgcagcagaaattgcacaggctgaagaacaagcccgtaagcggcag
gaagaaagggagaaagaggctgcagagcaagctgaacgcaatcagaccaccatggccact
gaggaggagcaggcagccagcaaggcagaggagaaaaaagaagagggaactcctcccatg
gaaacagaagaacctcctccagaagaagctattgagactcagcagaatggtgaagggacg
tccactcctgaagacaaggaaagtgggcaagaaggtgttgaaagcatggcagaggaagga
acaagtgatagcaacactggttcagaaagcaatagtgccctagctgaagaacccccagct
gacccaataacttcagaagatggtgaaaagaaagagtaa
DBGET
integrated database retrieval system
