Thamnophis sirtalis (common garter snake): 106555535
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Entry
106555535 CDS
T06107
Name
(RefSeq) homeobox protein SIX5-like
KO
K19474
homeobox protein SIX5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106555535
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
106555535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106555535
NCBI-ProteinID:
XP_013929879
UniProt:
A0A6I9Z0Q5
LinkDB
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Position
Unknown
AA seq
473 aa
AA seq
DB search
MDPLAFGVEMKPESAGQGAVLPPLLSLPEASPLLSEHKGALLAAVPMPQVVPSNEESPTI
PLLPVAPQPAAPQSPQIVPLAKLVPVGQALATSQGTGPVGGGPTGAASPAISAAPVLSVP
GSSAGQATVLHVSAPSLLPLSQVSPPSQVVPLSQTVPGAQLLSPPQMVPVSPTQIYTMSH
GAPAPQLVSIPQVAQGSQLISLPQVVPTSQVVTLQPGVGSPIQILTSAAPIKVGPVAGAP
QGTGVAGGLAQNNVHLLNTGVGVTALQLPGTAQGNLLLANPATGNSTIVTGMAVQQGKLN
LTATFPASVLMTLVLSAPAASTLTLPIKQEVAMATPAALGAPEGNSGLLAGVPSVLPAEA
SPLPSSDSAASVAFRADAAPGALLSSFSQPESLSMSQPQVVWSNPVSMALQGSNSGGLFE
VEKGSMEELRLPEGEGLLLAAAGGDPLGPEALDSDEKVLTQLQSVPVEESLDL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggacccgctggcgttcggggtggaaatgaagccggagtctgctgggcagggggcagtt
ctccctcccctcctgtctctcccggaggcctccccgctcctctccgagcacaagggggcg
ctgttggctgcggtgcccatgccccaagtggtcccttccaatgaggaaagccccacaatc
cccctgttgcccgtagcccctcaaccggcagcgccccaaagtccgcagattgtgcctctt
gctaaactggtccctgtcggtcaagctctggccacttcccagggaacagggccagtgggg
ggtgggcccacaggggcggcatctcctgccatctctgccgcccctgtcctctctgtccct
gggtcctctgcaggccaggccacggtcctccacgtttctgccccctcgcttctcccgctc
agccaggtctcgcccccttcccaggtggtccctctgtcccagacggttcccggggcacag
ctgctgtccccacctcagatggtccccgtgtctcccactcagatctacaccatgtcccac
ggggctccggcccctcagctggtctccatccctcaggtggcgcagggctcccagctcatc
tccttgccccaagtggtacccacctctcaggtggtgactctgcagccgggcgtgggcagc
cccatccagatcctgacaagcgccgcccccatcaaggtgggccctgtggccggggcccca
caaggcacgggagtcgccggaggcctcgcccagaacaacgtccatctcctcaacacgggc
gttggcgtcaccgctctgcagcttccaggcacagcacaaggtaacctcctgctggccaac
ccggccaccggcaacagcaccatcgtcaccggcatggccgtccagcagggcaagctcaac
ctcaccgccaccttcccggctagtgtgctgatgaccctggtgctctccgctccggccgcc
tcgaccttgactcttcccatcaagcaggaggtggcaatggccacgccggcagctctggga
gcccctgaaggcaacagtgggttgctcgcgggagtcccctcggtgctgcctgcggaagcc
tctcctcttccatcctccgacagtgccgccagcgtggccttcagagcagacgccgcgcca
ggcgcgctcctttccagcttctcccagccggagagcctgtccatgtctcagccgcaggtc
gtgtggtccaacccggtgagcatggccctgcaggggagcaactccgggggcctctttgag
gtggagaaggggtccatggaggagctgcggctgcccgagggtgagggtcttttgctggct
gctgctgggggggaccccctgggccccgaagctctggactcggatgaaaaagtgctgact
cagctgcagtcggtcccagtggaagagtctctggacctgtaa
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