Telopea speciosissima (New South Wales waratah): 122646087
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Entry
122646087 CDS
T07910
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122646087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tss04040
]
122646087
Ion channels [BR:
tss04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122646087
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
122646087
NCBI-ProteinID:
XP_043695497
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Position
11:36720863..36830953
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AA seq
740 aa
AA seq
DB search
MFDCGRSQFLGGHRDKFVRLDDLDSRISMSSDVGGMKRCGFNIEGLTRAGRASNTPSKSF
RSGMRRGSEGLKSIGKTLKCGVSRAVFPEDLKVTENKIFDPQDRFIQLWNRFFVISCILA
VSVDPLFFYLPVINNQTNCLGIDKKLAITTTTLRSIIDCFYIIHMAIQFRTAYIAPSSRV
FGRGELVIDPAQIAQRYLRGLFILDFIAVLPLPQIVIWRYLQRSTGTDVLGTKEALLFIV
LLQYIPRFFRILPLMSELKRTAGVFAETAWAGAAYYLLWYMLASHIVGAFWYLLAVERNN
ACWKKACQANKQCSQDYLYCGNWQMKGYDDWLDISEGVLSTACNPEGDFNFGIYTQALTS
GVVASRLFLSKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIFGLILFALLIGNM
QTYLQSLGIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEESLVQN
LPKDLRRDIKRHLCLALVRRVPLFDNMDERLLDAICERLKPSLYTEKTYIVREGDPVDEM
LFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKAIT
EVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKLAE
LRRREQEDDDEVEQEGRGFGRADDNASSGSSSLGATILASRFAANALRAVQLRRNSKSAT
MGLVKVPKPPEPDFTADDAD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggtagatcgcagtttttgggtgggcacagggacaagtttgtaaggttg
gacgacttagattcaagaatatcgatgtcttctgatgtagggggaatgaaaagatgtgga
ttcaatattgaagggttgacacgtgctggtcgtgcatccaacaccccgtcaaaatctttc
aggagcggaatgagaagggggtctgaagggctcaagtcaattggcaaaactcttaagtgt
ggggtttctcgagcagtatttcctgaagaccttaaagtgacagagaataagatatttgat
cctcaagatagattcatccaattatggaatagattttttgtcatatcttgtattctagca
gtatccgtggatcctttatttttttatcttccagttatcaataatcaaacaaattgtctg
ggtatagataaaaaattagctatcacaactacaacactgcggtcaatcattgattgtttc
tatattattcacatggctattcaattccgcacagcttatattgccccatcatctcgagtt
tttgggcgaggtgagcttgtgatagatcctgcacagatagcacagcgttatttgcgagga
ttatttatcttagattttattgccgtgctacccttgccacagattgtaatttggagatat
cttcagagatcgactggcacagatgtacttggtacaaaagaggcattacttttcattgtc
ttgcttcaatatatcccgaggtttttcagaatcttacccctaatgtcagaattgaagagg
actgctggagtctttgctgaaactgcttgggctggtgctgcctattatttgctgtggtac
atgcttgcaagtcatatagttggtgctttctggtacttattggcagtagaacgcaataat
gcttgctggaagaaggcttgtcaggctaacaagcaatgcagtcaagattatttgtattgt
ggcaactggcaaatgaaaggttatgatgactggcttgatatcagtgaaggtgtacttagt
acggcatgtaatccagaaggagatttcaattttggaatatatacacaggctttgacatct
ggtgttgttgcatcccggctattcctgtctaaatattgttactgtttatggtggggtcta
caaaatttgagtactcttggccagggactccaaaccagcacctatcctggcgaggtcatc
ttttccatagctcttgctatttttgggctcatcctctttgcactcttgattggcaatatg
cagacctaccttcagtctcttggtatccgacttgaggaaatgagggtcaaaaggcgtgat
tcagagcagtggatgcatcaccgtttgcttccacaagatctcagggagcgagtcaggagg
tatgatcagtacaagtggttggaaactcgtggagtggatgaagaaagcttggttcagaac
ctaccaaaggatctcaggagggatataaaacggcatctgtgtttggctttggtgagaagg
gttcctctgtttgacaatatggatgaacggttgttggatgccatttgtgagcggctgaag
cctagtttgtacacagaaaaaacttacattgtccgggaaggagatccagtggatgagatg
cttttcataatacgtggtcgcctggagagtgtgaccaccgatggtggcagaagtggattt
ttcaaccggagtctcctgaaagaaggggatttctgtggagaagaactccttacctgggca
ttggatcccaaatctggttctaacctcccatcttctacccgaacagtgaaggctataaca
gaggtggaggcttttgccctgatagctgaggagttgaagtttgttgctagtcagtttagg
cgcctgcacagcagacaggttcagcacacattccgtttttactcacagcagtggaggaca
tgggctgcctgctttatccaagctgcttggcgccggtattccaagaggaagttggcagag
cttcgacgtcgagaacaagaagacgacgacgaagtagaacaagaaggtcgtggttttggt
agggctgatgataatgcttctagtggttcatccagtcttggtgcaaccatccttgcatcc
cgttttgcagcgaatgctctacgggcagtccagcttcgtcggaattccaagagtgctact
atggggttggtgaaagtaccaaagcctccagagcctgactttactgctgatgatgcagat
tga
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