Telopea speciosissima (New South Wales waratah): 122651542
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Entry
122651542 CDS
T07910
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122651542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122651542
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122651542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
NBCH_WD40
ANAPC4_WD40
WDR54
Nup160
WD40_like
PALB2_WD40
PROPPIN
CDtoxinA
Motif
Other DBs
NCBI-GeneID:
122651542
NCBI-ProteinID:
XP_043700893
LinkDB
All DBs
Position
2:complement(27319855..27349403)
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AA seq
947 aa
AA seq
DB search
MVKSYLRYEPATVFGVVVSVDSNISYDSTGKHLLTPALEKLGVWNVRQGVCSKTLSPSPS
SSGPSLAVTSIASSPSSLIASGYADGSIRIWDIIKGTCDTTLNGHKGAVTALRYNKLGSF
LASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDSGKKLVSSSKDKFLRVWDLDTQ
YCMQIISGHHSEIWSIDVDTDETYLVTGSADPELRFYTIHHELVDREPSLNPEGTETVSG
GDSARNKWEILKLFGEIQRQSKDRVATVRFNKSGNLLACQVAGKIVEIFQVLDDAESKRK
AKRRIHRKREKKLSKGAPEATENGDSNPGPGEEGRAPVVIVSDVFKLLQTLRASKKICSI
SFSPATPKSSLASLALSLNNNLLEVYSIDSSTASKTLAIELPGHRSDVRSVILSSDDTLM
MSTSHNTVKIWNPSTGSCLRTIDSGYGLCGSFVPGDRHALVGTKSGTLEIIDIGSGTCME
VVEAHGGSVRSIAMTPDGSGFVTGSADHDVKFWEYQLMQKPGQDSKHLTVTNIRTLNMKD
DVLVVAISPDAKFIAVALLDCTVKVFFLDSLKLFLTLYGHKLPVLCMDISSDGDLIVSGS
ADKNLKIWGLDFGDCHKSIFAHADSVMAVQFVGNTHYMFSVGKDRLVKYWDADKFELLLT
LEGHHAEVWCLVVSNRGDFVITGSHDRSIRRWDRTEEPFFIEEEKEKRLEEMFEADVDSS
FESRHALREVLPEEGAVGLAGKKTRETLTATDLIIDALDMAEEELKRMAQHKVDNASGRI
TSFQPNVMMRGLSPSDHVLHALSSVHTNDLEQTLLSIPFSDALKLMSYLKDWAYIPDKVE
LVSRVATVLLQTHHSQLVTTPASRPVLTILKDILYTRIKECKDTLGFNLAAMDHLKQLMS
LKSDVLFRDAKTKLLEIRSQHSKRLEARTDTKEEKRKKKKLKSRAGA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatcgtacctcagatatgagcctgcgacggtatttggtgtggtagtatcagtg
gattccaacatcagttacgacagcactggaaaacaccttctcacacctgcgctcgagaag
ctcggtgtttggaacgtcaggcaaggcgtctgctccaaaaccctctccccttctccttcc
tcatccggcccttccctcgccgttacttccattgcttcctccccttcttctttgatagcg
agtggttatgcggatgggagtataaggatttgggatatcattaaaggaacttgtgatacc
accttgaacggccataaaggtgctgtcactgcacttcgttacaataagcttggctccttt
ctcgcttccggaagcaaagataatgatattatcttatgggatgtggtgggcgagtctgga
cttttccgtcttcgtggccaccgggatcaggtgaccgaccttgttttcttggattcgggt
aaaaagcttgttagttcctccaaggacaaatttttaagagtttgggatcttgacactcag
tattgtatgcaaataatcagtggtcatcacagtgaaatttggtccattgatgtcgataca
gatgagacatatttggtcactggatctgcggacccagaactgcggttctacacaatacat
catgaattggtggacagagaaccttctttaaatccagagggaactgaaactgtgagtggt
ggagactctgctcggaacaagtgggaaatcttgaagctgtttggtgaaatccaacggcag
agcaaggatagggttgccactgtgagattcaacaaatctggaaatctacttgcttgtcaa
gtggctgggaagatagtagagatattccaagtattggatgatgctgaatctaaacgtaaa
gctaaaaggaggattcaccggaagagggagaagaagttgtccaaaggggctccagaggca
actgaaaatggagactcaaaccctggaccaggagaggaaggaagagctcctgttgtcatt
gtttctgatgtatttaagcttcttcagacattgcgtgctagcaagaagatctgctcaatt
tctttctctccagcaaccccaaagagttcactggcttctctggcattgtctttgaacaac
aatttgttagaggtttattcgattgacagcagcacagcaagtaaaacccttgctattgaa
cttccggggcatcgttctgatgttagaagtgtcattcttagctcagatgacactctcatg
atgtcaactagtcacaatactgtaaagatttggaatccaagtactggttcatgccttcgg
actattgattctgggtatggtttgtgtggctcatttgttcctggcgaccgtcatgcactt
gttggaaccaaaagcggaacattagaaatcatagacattggtagtggtacttgcatggaa
gtagtggaggctcatggtggctctgtgcggtcaattgctatgactccagatggaagtggt
tttgtgacaggaagtgcagaccatgatgttaaattctgggagtatcaactcatgcaaaag
cctggtcaagactctaaacacctaactgtgaccaacataaggactttgaatatgaaggat
gatgttcttgtggttgctattagccctgatgctaaattcattgctgttgcccttttagat
tgcacagtcaaggttttctttctggattcactgaagctttttctgacattgtatggtcac
aagcttcctgtgctgtgcatggacatttcatcagatggagatctcatagtcagcggttct
gcagacaaaaatttgaaaatttggggtttggattttggtgattgtcacaaatccattttt
gctcatgctgacagtgttatggcagtgcaatttgttggcaatacccattatatgtttagt
gttgggaaagatcggcttgtaaagtattgggatgctgacaaatttgagttgcttttaact
cttgaggggcatcatgctgaagtgtggtgtctcgtggtcagcaaccgtggtgattttgtc
atcacaggttctcatgaccgatcaatacgtcgttgggatcgtaccgaagaacccttcttt
attgaggaagagaaggagaaaagattggaagaaatgtttgaggctgacgttgatagttca
tttgaaagtaggcatgcacttagggaagtacttccggaggagggagctgtagggttagca
gggaagaagactcgagaaaccctcactgcgactgacttaattattgatgcactagacatg
gcggaggaagaattaaagcggatggctcagcacaaggtggacaatgcaagtggaagaata
acttcctttcaaccaaatgttatgatgcgagggctctctccatctgatcatgtcctccat
gctctttctagtgttcacaccaatgatctggagcaaacattgctgtctataccattctct
gatgccttgaagcttatgtcttacttgaaggattgggcttatattcctgataaggttgaa
cttgtttctcgcgttgctacagtgctcttgcagacacatcatagccaattggttactacc
cctgcttccagacctgtcttgaccattctcaaagacattctttatactagaatcaaggaa
tgcaaggacacccttggtttcaaccttgcagcaatggatcatctgaagcaattgatgtct
ttgaaatctgatgtccttttccgagatgcaaaaacaaagctacttgaaatccgttcacaa
cattcaaaacgtctggaagcaaggactgacacaaaagaagagaagaggaaaaagaagaag
ctgaagagtagagctggggcctaa
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