Telopea speciosissima (New South Wales waratah): 122658027
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Entry
122658027 CDS
T07910
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122658027
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122658027
Spliceosome [BR:
tss03041
]
Complex C
Other components
Complex C specific factors
122658027
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
122658027
NCBI-ProteinID:
XP_043708813
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All DBs
Position
4:68018549..68028445
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AA seq
594 aa
AA seq
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MEPSSIMDEKDDDYVEYIPVKKRRAMEAQKILQRKGKSSALEDESEKSKLAEAKPSLLVK
ASQLKRDLPEISPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPMVTGWKPPLAI
RRMSSKECESIRKQWHILVDGEDIPPPVKNFKDMRLPEQILKKLKAKGIVQPTPIQVQGL
PVILSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEVMMPIVPGEGPFGLVICPSRELARQ
TYEVVEQFLIPLKEAGYPELRPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLKDMLAKKK
MNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVK
PVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYL
LLKGVEAVAIHGGKDQEDREYAISSFKAGIKDVLVATDVASKGLDFPDIQHVINYDMPAE
IENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMED
VDAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttcatctatcatggatgaaaaggatgatgattatgtcgaatatatccctgtg
aaaaagcgcagggctatggaagcccagaaaatcctccaacgcaaggggaaatcttcagct
ttggaggacgagtctgagaagtcaaagcttgctgaagcaaaacccagcctccttgtcaag
gcttctcagcttaagcgtgacctccctgagattagccctactgagcagattgtgcaacaa
gagaaggagatgattgagcacctttccgaccgcaagaccctcatgtcagttcgtgagcta
gctaagggaattacctatacggagcctatggtgacaggatggaaacctcccttggcaatt
cggaggatgtcttcaaaggaatgtgaatctataaggaagcagtggcatatacttgtcgat
ggcgaagatattcctccaccagtgaagaactttaaagacatgcggttgccagaacagatt
ttgaagaaactgaaagctaaggggattgtgcagcccacacctattcaggtccagggactt
cctgttatcttgtcagggagggacatgattgggattgcgtttactggttcaggtaagact
cttgtttttgtgctgccacttatcatggctgcattgcaagaggaggttatgatgcctatt
gttcctggggaaggtccttttggcttggtgatttgcccgtcaagagagcttgctaggcag
acttatgaagttgtggagcagtttttgatccctttgaaagaggctgggtatccggagttg
aggccattactttgtattggtggggttgatatgcgatcgcaactagaggtcgtgaagaag
ggtgtgcatattgttgttgctacacctgggaggttgaaggatatgcttgcgaagaagaag
atgaatcttgacaactgcaggtacttgacactggatgaagctgacaggttagttgatttg
gggtttgaagatgatatcagagaagtgtttgatcacttcaaagcccaaagacaaactctt
ctattctctgccaccatgcccacaaaaatacagaactttgccagaagtgcattggtaaaa
cctgttacagtcaacgtgggaagagctggagcagcaaatctggatgtgatacaagaagtc
gagtatgtgaaacaagaagcaaagattgtttaccttcttgaatgtctacagaagacccca
cctcctgtcctcatattttgtgagaacaaagctgatgtggatgatattcatgaatatctc
ctgcttaaaggagtcgaggcagtagccattcatggaggcaaggaccaagaagatagagaa
tatgccatttcatctttcaaagcagggataaaggatgtcttggtggccactgatgttgct
tcaaaggggctagattttccagatatccagcatgtaattaattatgacatgcctgctgaa
attgagaattatgtccaccgtattggtcgaacaggaagatgtgggaaaactggaatagca
acaacatttataaacaagaaccagagtgagaccacactgctggacttgaagcacctccta
caagaagcgaaacaaagaatcccgcctgtgcttgcggaactgaatgatccaatggaagac
gtggatgccatcacaaatgcaagtggtgttaaaggttgcgcctattgtggtgggcttggc
caccgtattcgtgattgccccaagctggagcaccaaaagagtatggcaatagcaagctca
aggcgggactattttggttctggaggttatagaggagaaatttga
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