Telopea speciosissima (New South Wales waratah): 122660467
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Entry
122660467 CDS
T07910
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A-like
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122660467
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
122660467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xpo1
Motif
Other DBs
NCBI-GeneID:
122660467
NCBI-ProteinID:
XP_043711715
LinkDB
All DBs
Position
4:58346791..58358838
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AA seq
1330 aa
AA seq
DB search
MAVSIVTQTQTTLWDSVVEHTKVLQEKGGDPLLWAIQLSSSLNSAGVSLPSTEVAHLLIS
HICWENNVPITWKFLEKALAGKIVPPLLVLALLSRRVITSRQFRPAAYRLFMELLKRYAF
SFSSQINGQNFQKVMKSVDDVLHLSQIFGIQACEPGVLVVEFVFSIVWQLLDATLDDEGL
LELTPEKEPRWATRPHDMELDGHDSFDGKRIEHNERLHKTNMDLAVELIGQFLQNKVTSK
LLYLACQNMPSHWGDFIQRLRLLAENSSVLRSSKLLSPEFLLQLISDKQKLLSRKCKTSS
QQEFHAVLASGSLTSCASQCYGASRSALWLPIDLILEDAMDGYQVTATSAIDTLAGLVKS
LQAVNGTTWHDAFLGLWIAALRLVQRERDPIEGPVPRTDTRLCILLCITTLVVVALIEEE
ELALIDEAEHSPTNQWKEKQVGGKRRKDLISSLQILGDYEGLLTPPQSVIFVANQAAAKA
MMFVSGLTVGSGYFECINMSDMPMNCSGNLRHLIVEACIARNLLDTSTYFWPGYVNGRVN
QIPHGMPGQVPGWSSLMKGAPLTPSMINALVTAPASSLAELEKIFEIAINGSDDEKISAT
TILCGASLIRGWNIQEHTVQFVIRLLSPPVPADFSEDESHLMRYAAMLNVLLIGIASVDC
VQIFSLHGLVPQLAGALMPICEVFGSCVSNVSWTLTTGEEISPHTVFSNAFILLLRLWRF
NHPPLEHVVGDVPPVESQLTPEYLLLVRNSQLVSFGNTPSDHNRSRRLATVTSPSSTQPI
FVESFPKLELWYRQHQACIASTLSGLVHGTPVHQIVDVLLNMMFRKMNKGGSQSLAPVAS
GSSSSSGPGEDASLRLKLPAWDILEAVPFVLDAALTACSHGRLSPRELATGLKDLADSLP
ASLATIVSYFSAEVTRGVWQPAFMNGTDWPSPAANLSNVEEQIKRILAATGVDVPSLVAG
GSSPATLPLPLAAYVSFTITFKLDRASERFLDLAGPALETLAAGCPWPCMPIVASLWTQK
VKRWSDFLVFSASRTVFHHNSDAVVQLVKSCFTATLGLNASPISNCSGVGALLGHGFGHF
HGGFSPVAPGILYLRVYRSIRDIMFMTEEILCLLMQSVREIAGEGLLKEKMEKLKKTKYG
MRYGQVSLATAMTRVKVAASLGASLVWLSGGLSLVQSLIKETLPSWFISAHGSEQEEGCR
GMVAMLRGYALAYFAILCGTFAWGVDSKSSASKRRPKILRAHLEFMASVIDGNITLGCDL
ATWRAYVSGFVSLMVACTPTWMLEVEVDLLKRLSKGLRQCNEEELALALLGRGGGWAMGA
AAELIIESEL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttccatagtaacccagacgcaaacaactttgtgggatagcgttgtagagcat
acgaaggttttgcaggagaagggtggtgatcctctgctctgggcaatacagttatcttca
agtctcaactctgcaggtgtttctttgccttcgacggaagtcgcacatctgctgatttct
catatttgttgggaaaataatgttccaatcacatggaagtttctcgagaaagctttggca
gggaagatcgttccgccgttgcttgttcttgctctgctctctcgaagggtcattactagt
cgacagttccgaccagcagcatacaggctctttatggaacttcttaagagatatgctttt
tcattttcatctcaaataaacggacaaaattttcaaaaggtcatgaaatctgtggatgat
gttcttcatctgtcccagattttcggtattcaagcatgtgaaccaggagtccttgtagtt
gagtttgtcttttcaattgtatggcaattgcttgatgcaacattagatgatgaaggactg
ctggaactgacaccagaaaaggagcccagatgggctactaggccacatgacatggaactt
gatggtcatgatagctttgatgggaagagaattgaacataatgagagacttcacaagaca
aatatggatcttgctgttgagctaattggacaatttctgcaaaataaagtaacttccaag
cttctttacttggcatgccaaaacatgccatcacattggggagatttcattcagcggtta
cgactgcttgcagaaaattcatcagttttgaggagttcaaaattattatctccagagttc
ctgctgcagttgatatcagataaacaaaaactcttgtcccgcaaatgcaaaacaagttca
cagcaagaattccatgcagttttggcttctggatctctgacttcttgtgctagtcagtgt
tatggggctagtaggtctgcactttggcttcctattgatctgattctagaagatgcaatg
gatgggtaccaagtcactgcaacaagtgcaattgatactcttgccggtttggtaaaatct
ctccaagcagttaacggtaccacctggcatgatgccttcttaggtctatggattgcagct
cttcggcttgttcaaagggaaagggaccctattgagggtcctgtccctcgaacggatacc
cgcttatgcattttactgtgcattacaactcttgtggttgttgctcttattgaggaagag
gaacttgcattaattgatgaagcagaacatagtcccactaatcaatggaaagaaaagcaa
gttggagggaagcgtcggaaggatttgatctccagcttacagatacttggtgattacgaa
ggcttattgaccccacctcaatctgttatatttgtagcaaatcaggctgctgcaaaagcc
atgatgtttgtttcaggcctcaccgttgggagtggatactttgagtgcattaatatgagt
gacatgccaatgaactgctctggaaatttgcggcatttaatagttgaggcctgcattgcc
agaaacctactggacacatcaacatatttctggccaggctacgtgaatggtcgtgtcaac
caaatacctcatggtatgcctggccaagtgcctggttggtcatcattgatgaaaggtgct
ccactgactccatcaatgataaatgctttagtcacagctcctgcttcaagcttagcagag
ctcgagaagatatttgagattgcaataaatggatcagatgatgagaagatatctgctact
accattctttgtggggcatctctaattcgtggttggaatatacaggaacacactgttcag
tttgttataagattgctgtcacctcctgttcctgcggatttttctgaggatgaaagtcat
ttgatgcgttatgctgcaatgttgaatgttcttcttattggaatagcatcagttgattgt
gttcagattttctcgttgcatggcttggttcctcaacttgctggtgcattaatgccaatc
tgtgaagtttttggatcatgtgtatccaatgtctcatggactctcacaacaggggaagaa
atctctccccatacagtgttctcaaatgcatttattcttctattgaggctgtggagattt
aatcatccacctctcgaacatgtcgtgggagatgtgcccccagttgagtcccaacttact
ccagaatatttgttattggtgcggaactcccaattggtatcttttggaaacacacccagt
gatcacaatagaagcagaaggctggcaacagttactagtccatcgtccacacaacccatc
tttgtggaatcattcccaaaattagaactatggtaccgtcaacatcaagcttgtatagct
tcaacgctctctggtcttgtccatggaaccccagtacatcagatcgttgatgtacttctg
aacatgatgttcagaaagatgaataaaggaggaagccagtctttagctcctgtagcttct
ggaagcagtagttcttctggtccaggtgaagatgcttctctaaggctcaagttacctgca
tgggatatcctggaagctgttccctttgtgcttgatgctgctcttacggcctgttcccat
ggaaggctgtctcctcgtgaactggctacagggttaaaggatctagctgattctcttcct
gcatctctggcaacaattgtgagctacttctccgctgaagtgacacgtggtgtttggcag
cctgcttttatgaatggaactgattggccaagccccgctgccaatctgtccaatgttgag
gaacagatcaaaagaattctggctgccactggtgttgatgttccaagccttgttgcagga
ggaagctctccagctacacttccactgcccttggctgcctatgtgagcttcacaataacc
tttaaacttgatagagcctcagaacgcttcctcgacctggctggcccagccttggagacc
cttgcagcaggttgcccgtggccttgcatgccgattgtagcctctttgtggacccaaaaa
gtcaagcgttggagtgattttcttgtcttctccgcatctcggacggtcttccatcacaat
agtgatgcagtggttcagctcgtgaagagctgcttcacagctacacttggtctgaatgct
tcaccaatctccaactgttctggtgttggggcacttctcggtcatggctttggccatttc
catggaggcttctcccctgttgcccctgggatcctctacttaagagtttatcggtctatc
agagatatcatgttcatgacagaagagatactatgccttttgatgcagtctgtgagagaa
atagcaggtgaaggtctattgaaagaaaaaatggagaaattgaagaagaccaaatatgga
atgagatatggccaggtttcacttgcgacagcaatgactcgggtaaaggttgcagcttca
ttaggggcttcattggtgtggttatctggtggcttgagtctggttcaatcgttgatcaaa
gaaactcttccatcttggttcatatctgcacatgggtcagagcaggaagaagggtgtagg
ggaatggtggcaatgctgagagggtatgcactggcatactttgcaatactttgtggaaca
tttgcttggggtgtcgactcaaaatcatctgcctcaaagcggcggccaaagatccttagg
gctcacttggagttcatggcaagcgtgattgatgggaatatcacacttggttgtgatttg
gccacttggcgggcctatgtgtcagggtttgtgagcctgatggtggcatgcactccaaca
tggatgttggaggtggaggtggatctcttgaagagactgagtaagggattgaggcaatgt
aatgaagaggaacttgccctggctctgcttggaagagggggaggttgggcaatgggtgca
gctgctgaactgataatagagagtgagctataa
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