Telopea speciosissima (New South Wales waratah): 122660582
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Entry
122660582 CDS
T07910
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122660582
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tss01002
]
122660582
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122660582
Enzymes [BR:
tss01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122660582
Peptidases and inhibitors [BR:
tss01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122660582
Ubiquitin system [BR:
tss04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122660582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
122660582
NCBI-ProteinID:
XP_043711891
LinkDB
All DBs
Position
1:19284723..19316426
Genome browser
AA seq
1150 aa
AA seq
DB search
MTMMTPPPLDQEDDEMLVPHSDFADGPQPMEAVAQAETASTVENQPVEDPPSSRFTWTID
NFTRLNAKKHYSEIFFVGGYKWRVLIFPKGNNVDHLSMYLDVADSVNLPYGWSRYAQFSL
AVINQIHNKYTVRKDTQHQFNARESDWGFTSFMPLSELYDPGRGYLVNDTVIVEAEVAVR
RVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSI
PLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRE
NGKYLSPEADRRVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDVK
RALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHL
RIRLKKEQEEKEHKKKEKAEAHLYTIIKVARNEDLVEQIGRDIYFDLVDHDKVRSFRIQK
QMPFTLFKEEVAKEFGIPVQYQRFWLWAKRQNHTYRPNRPLTHQEEQQSVGQLREVSNKA
HNAELKLFLELELGLDLRPIPPPDKTKEDILLFFKLYDPKKEELRCLVFPALLLLFSQCK
NHFFWGWGINQMTWFFFFRCVGRIFVKGTGKPVDILTKLNEMAGFAPNEEIELYEEIKFE
PSVMCEHIDKKLTFRSSQLEDGDIICFQKSPPVDSDEQYRYPDVPSFLEYVHNRQVVHFR
SLEKPKEDDFCLELSKLNTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIKFRG
VEHLADMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHSAIKDEVVIHSIRLPKQST
VADVINDLKTKVELSHPNAELRLLEVFYHKIYKIFPPSEKIENINDQYWTLRAEEIPEEE
KNLGPHDRLIHVYHFTKDTSQNQMQVQNFGEPFFLIIHEGETLAEVKVRIQKKLQVPDEE
FTKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDSAPKRAYAANQNRH
TFEKPVKIYN
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactcctccaccgttagatcaggaagacgacgagatgttggtacctcat
tcggatttcgctgacggtccccagccaatggaagcagttgcgcaagcggagactgccagt
acagttgagaaccagccagtcgaggatcctccgtcttcgagatttacgtggacgattgat
aactttactaggttgaacgctaagaagcactactctgaaattttctttgtcgggggttat
aaatggcgggtgctcatttttcccaagggaaacaacgtggaccatttgtccatgtatcta
gacgttgctgattcggtgaatttgccttacggatggagtagatacgctcaattcagcttg
gctgtgattaatcaaatccataacaaatacacagttagaaaagacacacaacatcaattc
aatgctcgagagagtgactggggttttacgtcgttcatgcctctcagtgaactgtatgac
cctggtagaggatatcttgtgaatgatacggttatagttgaagctgaggttgctgtccga
agggttgtggattactggacctatgactcgaaaaaggaaacaggttatgttggacttaag
aaccaaggggcaacctgttacatgaattctcttctccaaactctctatcatatcccctac
tttagaaaggctgtttaccatatgccaacaactgagaatgatatgccatcggggagcatc
cctctggctctgcagagcttattctataagcttcagtacagtgacaatagtgttgcaacg
aaagagctgaccaagtcttttggatgggacacatatgattcattcatgcaacatgacgtc
caagaacttaatagagttctttgtgaaaagctggaagataagatgaagggaactgttgtg
gagggtacaatacaacagttgtttgaagggcaccatatgaattatattgaatgtatcaat
gtggactacaagtctacaagaaaggagtcattttatgaccttcagcttgatgtcaaaggc
tgtcgagatgtttatgcttcttttgacaagtacgtggaagttgaacgccttgagggtgat
aacaagtatcacgctgagcaacatggactacaggatgctaggaagggtgtcctgttcatt
gactttcctcctgtccttcaacttcagctaaaacggtttgagtatgatttcatgcgggac
actatggttaagataaatgaccgctatgagttccctctggaattagaccttgatagagag
aacggaaaatatttgtcccctgaagcagatcggagagttcgcaacctctatacccttcac
agtgttttggttcacagtggcggggtgcacggtggacattattatgcttttatcaggcca
accctctctgaccaatggttcaagtttgatgatgaacgggtaacaaaagaagatgtgaag
agggccttggaggagcagtatggtggagaggaagagttaccacagacaaatcctggcttc
aataacactccgtttaagtttacgaagtactccaatgcatacatgcttgtatatatacgt
gaaagtgacaaagagaaaataatttgtaacgtggatgagaaggatatagctgaacatctt
aggataagattgaagaaagaacaagaagagaaggagcacaagaaaaaggaaaaagcagag
gcacacctttataccatcataaaggttgcacgaaatgaggatcttgttgagcagattggg
agggatatttattttgatcttgtggatcatgacaaagtccggagcttccgtattcaaaaa
caaatgccttttactcttttcaaggaggaggttgctaaagaatttggcataccagtgcaa
taccagcgcttttggctgtgggcaaagcgtcaaaaccatacctatcgtccaaaccggcca
ttgactcaccaggaagagcaacaatctgttggacagctgagggaggtttcaaataaagcg
cataatgcggagctcaagttattcttagaattggagcttggactggatttgcgtcctatt
cctccaccggacaagacaaaagaggatattctgcttttcttcaagctatatgaccctaag
aaggaagagctccggtgcttagtgtttcctgccctcctactgttgttttcccaatgcaaa
aatcattttttttgggggtgggggataaaccaaatgacatggtttttttttttcaggtgc
gttggaaggatttttgttaagggtactggcaagcctgtggatatcttaacaaagcttaat
gaaatggctggctttgccccgaatgaggaaatcgaactctatgaggaaattaagtttgag
cctagtgtcatgtgtgaacacattgacaagaaactcacgtttcgatctagccagcttgaa
gatggggacattatttgttttcagaaatctcctcctgttgacagtgatgaacagtaccga
tatcctgatgttccatcgtttttggaatatgtacataatcgtcaggttgttcatttccga
tctctagagaagccaaaggaggatgatttttgtctggagctatcaaagcttaacacatat
gatgatgttgtggaaagagttgctcgccaacttggtttggatgatccatccaaaattagg
cttacatcccacaattgttactctcagcaacctaaaccccaaccaattaagttccggggg
gtagagcatttagcagacatgctggtccactacaatcagacttccgatatcttgtattat
gaagtattggatattcctctgcctgaattgcaaggtttgaaaactttgaaagttgctttc
cattcagccataaaggatgaggtggtcattcatagtataagacttccaaaacagagcaca
gttgcagatgtaattaatgacctaaaaactaaggtcgagctgtctcatcccaatgcagaa
ctccgattgcttgaagttttttatcacaagatctataagatctttccccctagtgaaaag
atagagaacataaacgatcaatactggacattgcgagctgaggagattcctgaagaagag
aagaaccttggtcctcatgaccgcttgattcatgtttaccatttcacaaaagatacttcc
caaaaccagatgcaggttcagaactttggagagccctttttcctaatcattcatgaaggc
gagactttagctgaagttaaagtgcgtatacagaagaaattgcaggttccagatgaggaa
ttcactaagtggaaatttgcatttttgtcattgggtcgtccagaataccttcaagattct
gacattgtatccagtcgttttcagagaagagatgtctatggagcttgggagcaatatctt
ggactggaacactcggacagtgctcctaaaagggcttatgcagctaatcagaaccgtcat
acatttgagaagccggtaaaaatctacaactag
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integrated database retrieval system
