Telopea speciosissima (New South Wales waratah): 122661615
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Entry
122661615 CDS
T07910
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122661615
Enzymes [BR:
tss01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
122661615
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122661615
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
122661615
NCBI-ProteinID:
XP_043713005
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Position
5:8538105..8557641
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AA seq
648 aa
AA seq
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MTVKSPSYLPARLALFALLSASTFYCFWKSRRLRRQRVSSSQSPTTLHPDPSRGKIFFVS
QTGTSKALARRLFDLLTSNNIPFDLVDPKNYEPEDLPKETVVLLIASTWEDGKPPSHASF
FSNWLAESAEDFRVGSLLLSSCRFAVFGVGSRSYGETFNAVAKDFSKQMKALGASELLPV
GEGDVDERDLDAVFDVWYRKLVGLLKGDSKENGGLNGSRFTNESESESADEVDEDFNEEN
EPDTVIVDLEDIAGKAPSRKSSAVPVTNGVVNGEKDMVTPVLRANLEKQGYKIIGSHSGV
KLCRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWKWK
MDPPLEIVNAAIEQHTKMIKQMKGVPGVKLERLSEGLSPRHCALSLVGEPIMYPEINSLV
DELHRRRISTFLVTNAQFPEKIRLLKPITQLYVSVDAATKDSLKAIDRPLFGDFWERFID
SLKALQEKDQRTVYRLTLVKGWNIEDIDAYSDLFGIGKPDFIEIKGVTYCGSSATSKLTM
ENVPWHSDVKAFSEALALKSNGEYEVACEHVHSCCVLLAKVEKFKINGKWFTWIDYEKFH
DLVASGKPFSSKDYIAATPSWTVYGAEEGGFDPDQSRYKKERHHKTNR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgaagtctccctcgtatcttccggctcgcctcgctctcttcgcccttctctcc
gcctccaccttttattgcttctggaagtcccgacgtctccgccgccaaagagtttcctcc
tcccagagccccaccacccttcatcctgacccttccagaggcaagatcttttttgtctct
cagactgggacctctaaagccctagcccgtcgtctcttcgatcttctcacttcaaataac
atcccattcgaccttgtcgatcctaaaaattacgagcctgaagatctccctaaagaaact
gttgttctgctcattgcttcgacttgggaagatgggaaacccccttcccacgccagcttc
ttctccaattggctcgctgagagtgctgaagatttcagggtcggatctttactcctctca
agctgtaggtttgcggttttcggtgttgggagccgatcgtacggtgagactttcaatgct
gttgcaaaggatttctcgaagcagatgaaggcgcttggagcttcagagctcttgcccgtg
ggtgaaggcgatgttgacgaaagagacttggatgccgtttttgatgtttggtatcggaag
ttggttggattgttgaaaggggattctaaggaaaatggaggacttaatggctctagattt
accaatgagagtgagtctgaaagcgccgacgaagtggacgaggacttcaatgaagagaat
gaaccagatactgttattgttgatctggaggatattgctggtaaagctccttctaggaaa
tcatctgcagtgcctgtgactaatggggtggtgaatggtgaaaaagacatggtgactcct
gtgcttagagcgaacctagagaagcagggatataaaattattggttcacatagtggtgtg
aaactttgtagatggaccaagtcacagcttcgtggccgtggtggttgctacaaacactca
ttttatggcatagagagccatagatgcatggaggctacccccagtttggcatgtgccaat
aagtgtgttttctgttggagacaccacacaaatcctgttggaaagagctggaagtggaaa
atggatcctcctttagagattgtaaatgctgccatagaacaacacacaaaaatgataaag
cagatgaaaggagttcctggagtaaagctggagcgtctgtcagaaggtctctctcccagg
cattgtgccttgtcacttgttggtgaaccaataatgtatccagagattaactctcttgtg
gatgagctacaccgaaggcggatatctacttttcttgttacaaatgcacaattccccgaa
aaaattagattgctgaagcctattacccagctatatgtgagcgtagatgcagcaacaaag
gatagcttgaaggcaattgataggccactctttggggacttctgggagcgtttcattgat
tcactgaaagctcttcaagagaaagaccagagaacggtttaccgtttgactttggttaaa
ggctggaatatcgaagatatagatgcttactctgacttattcggcattgggaagccagat
ttcattgaaattaagggtgttacctactgtggctcgtctgcaacttctaagttgacaatg
gagaatgttccctggcattctgatgttaaagccttttcggaggcattagctctgaaaagt
aacggggagtatgaggttgcttgtgagcatgttcactcttgctgtgtcctcttagcaaag
gttgagaagtttaagatcaatgggaaatggttcacttggatagattatgaaaaatttcat
gacctggtggcttctggaaagccatttagcagcaaggactacattgccgccactccatcc
tggactgtctatggtgcagaggaaggcggttttgatccggatcaatctcgttataagaaa
gagcgacaccataaaacgaacaggtga
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