KEGG   Trachemys scripta elegans (red-eared slider): 117870706
Entry
117870706         CDS       T07347                                 
Symbol
REV1
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117870706 (REV1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tst03400]
    117870706 (REV1)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    117870706 (REV1)
SSDB
Motif
Pfam: IMS IMS_C REV1_C BRCT POLH-Rev1_HhH BRCT_2 LIG3_BRCT UBM IMS_HHH PTCB-BRCT Thiamine_BP Cdd1 DUF1805
Other DBs
NCBI-GeneID: 117870706
NCBI-ProteinID: XP_034613861
LinkDB
Position
1:complement(230379539..230479801)
AA seq 1268 aa
MRRGGWRKRASNDDGWGIWGGYMSAKVQKLEDQFQSDAVIQHQKDGTSSNIFSGVAIYVN
GFTDPSADELRRLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKELKGEKVVRPEWIVES
IKAGHLLSYIPYQLYTKQSSVQKGLNFNTICKPEDPMPGPSNIAKELNNRVNCIIKKYET
ENEIKANGISSWNEEEKEESEDLGFMELEQVFPGRKQNGIQHHRDSTAIFNGHTHNSTSA
LQTQDCVVPSGNRVANRFSPGSVQEKGKTEKGIIDFRDCTMQQLQESNKNTDLLKNPHRT
TSNSFSSSSLHSNTKINGAHHSTVQGPLSTKSTSSVPTHSKATPSSLSKPLDCSFISDFY
SRSRLHHISTWKSELTEFVNTLQRKNNGVFPGREKLKKLKAGRSALMIADTGNVSVLSSS
KHQRCIMHMDMDCFFVSVGIRNRPDLKGKPVAVTSNRGAGRAPLRPGANPQLEWQYYQNK
ILNGKAENRIPDKLDSSIGENPDSAEMNGADLDITGLSMAEIASCSYEARQVGVKNGMFF
GQAKQLCPSLQAVPYDFHAYKEVTQTVYETLASYTHNIEAVSCDEALVDITEILAETRLT
PDEFASAIRTEIKDQTKCAASVGMGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLV
SNLPGVGRSMESKLASFGIKTCGDLQYLTMSKLQKEFGPKTGQMLYRFCRGLDDRPVRSE
KERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQHRLEAAGMKGKRLTLKIMVRKAGAPV
EPAKYGGHGICDNIARTVTLDHATDSAKVIGKETLNMFHTMKLNIADMRGVGIQVHQLVP
INKTTSAVSSRSSVPSGHLPRGSHSVIDLLHVQKTKKSSEEEHKEVFVAAMDLEISSASR
TCTFLPSLTTHMTSGLNPITSKAESAVKWNGLHTPISVKSRLNLSIEVPSPSQLDQSVLE
ALPSDLREQVEQMYTIQQGETYGDSKKEPINGCNSEFLPQPVGAVLLQIPDLQEPNSDAG
INVIALPAFSQVDPEVFAALPTELQEELKGAYDQRQKQSENVIYQQPMSTFVSKNPLLQL
KQATVKTKKKNRKKNQVSPVKKIQSPLKNKLFGSPAKNMVSASGSPQKLIDGFLNQEGTA
TGKSQVEPVPSTSNTSGPSALQTAQSGSIRSQVPNLAGAVEFSDVKTLLKEWITTISDPM
EEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQQSVESVWNMAFDFILDNVQVVLQQT
YGSTLKVI
NT seq 3807 nt   +upstreamnt  +downstreamnt
atgaggcggggtggatggaggaaacgagccagcaatgacgatggctgggggatatgggga
ggatacatgtctgcaaaggtccagaaactggaggatcagttccagtcagatgcggttata
cagcatcagaaggatggaacttcatccaatatctttagtggagttgccatctatgtcaat
ggctttacagatccttcagctgatgaattaaggaggttaatgatgttgcatggtggccaa
taccatgtgtactattccagatccaaaacaacgcacatcattgccacaaatcttccaaat
gccaaaataaaagaactgaaaggggaaaaggtggttcgaccagaatggatcgtagaaagc
ataaaagccggacatctcctctcatacattccatatcagctttacacaaagcagtcaagt
gttcagaaaggtctcaactttaataccatatgcaaacctgaagatcctatgccaggtcct
agcaatatagctaaagagctcaacaacagggtaaattgcataataaaaaagtacgagact
gaaaatgagatcaaagccaatggaatcagtagctggaatgaggaagagaaagaagaaagt
gaagatttaggctttatggagctggagcaggtctttcctgggaggaaacaaaatggaatt
cagcatcacagagacagcactgccatttttaatggacatactcacaattctaccagtgcc
ttacagacacaggattgcgtggtgccctctggcaacagagttgcaaacaggttctctcca
ggctctgtgcaggagaaggggaagactgaaaaaggcatcattgactttagagactgcact
atgcagcagttgcaggaaagcaacaaaaacacagatcttttaaagaacccacataggact
acaagtaattcattctcatcttcatctttgcacagtaatactaaaataaatggtgctcac
cactccactgttcaggggcctttaagcacaaaaagcacttcttcagtaccgactcatagc
aaggccactccctcatcattgtccaaacctttagactgcagttttatttctgacttttac
tctcgttcaagactgcatcacatatctacatggaagagtgaattgacagaatttgtcaat
accctgcagagaaaaaacaatggtgtctttccgggaagggaaaagttaaaaaaattgaaa
gcgggcaggtctgcacttatgatagctgacacaggtaatgtttctgtcttaagttcatcc
aagcatcagcgctgtataatgcacatggatatggattgcttctttgtatccgtgggtatt
cgaaataggcctgatctcaaaggaaaaccagtggctgttacaagcaacagaggtgctgga
agggcaccacttcgccctggtgcaaacccacagctggaatggcagtattaccagaataag
atattgaatggcaaagcagaaaatagaattcctgataaactggactcatcaatcggagag
aatccagattctgctgagatgaatggagctgacttggatatcactggtttgtcaatggct
gaaattgcatcttgtagttatgaagccagacaagttggggtgaagaatggaatgtttttt
ggccaagcaaaacagctatgtccaagtcttcaagcagttccatatgacttccatgcatac
aaagaagttacacagacagtgtatgagacactggccagctatactcataacatcgaagca
gtcagttgtgatgaagcgctagtagatatcactgaaatccttgcagagaccagactgact
cctgatgaatttgcaagtgctatccgcaccgaaatcaaagaccagactaaatgtgctgcc
tctgttgggatgggttccaatattctgctggccagaatggcaactcgcaaagcaaaacca
gatggacagtatcacttaaaacctgaggaagtggatgattttattagaggtcagctagtt
agcaatcttccaggagttggtaggtcaatggaatccaagttggcatcttttggaattaaa
acctgtggagacctacaatatcttactatgtcaaaactccagaaggaatttggtccaaaa
acaggacagatgctctacagattttgtcgtggtttggatgaccgacctgttcgatcagaa
aaggaaagaaaatctgtttcagctgagatcaactatggtataaggtttactcagcctaag
gaagcagaagctttccttcttagtctttcagaagagatccaacatagacttgaagctgct
gggatgaagggaaaacggttaactcttaaaatcatggtcagaaaggctggggcccctgta
gagcctgcaaaatatggaggccatggaatctgtgacaacattgccagaactgtaactctt
gaccatgcaacagatagtgcaaaagtaattgggaaggaaacactaaacatgtttcacaca
atgaaattgaacatagcagatatgcgaggggttggaattcaggtgcatcaattagttccc
atcaataaaaccacttcagctgtttcctctcgctcatcagtaccatctggacatttacct
aggggatcacattcagttatcgatcttctccatgttcagaaaactaagaaatcttcagaa
gaagaacataaagaagtatttgtggctgctatggatctcgaaatatcatctgcatcaaga
acatgcacttttctgccatctctcactacccatatgacatctggtctcaatcccattacc
agcaaggctgagtccgcagtcaaatggaatggtttacacactcctatcagcgtaaaatca
agacttaatttaagtattgaggttccttcaccttcccagttagatcaatctgtcttggaa
gcattgccatctgatctcagagaacaagtagagcaaatgtacaccattcaacagggagag
acttatggtgatagcaaaaaagagcccataaatgggtgtaacagtgagtttctgccacag
ccagttggagcagttctcttacaaataccagacctccaagaaccaaacagtgatgcagga
attaatgtaatagccctgccggcattctcgcaggtggacccagaggtttttgctgcacta
cctactgagctgcaagaggaacttaaaggtgcatatgatcaaaggcaaaagcagtcagag
aacgtcatttatcagcaaccgatgagcacctttgtatcaaagaatcctttattacagttg
aagcaagcaacagtgaaaactaagaaaaaaaacaggaaaaaaaatcaagtcagtcccgtg
aaaaagattcaaagtcctttgaaaaacaaactctttggtagccctgcaaaaaacatggtg
tctgcttctggaagcccacagaagctaatagatggtttcttaaatcaggaaggtacagcc
actggtaaatctcaggtggaaccagttccatccacctcaaatacttcaggcccatcagct
ttgcagacagcacagtctggttcaattagatcacaggtaccaaatctggctggagctgtt
gaattcagcgatgtaaagaccttgctcaaagaatggattacaactatttcagatcccatg
gaggaagacattctacaggttgtgaagtactgtactgatctgatagaagaaaaggacttg
gaaaagttagatctggtcatcaagtacatgaaaaggttaatgcagcagtctgtggaatca
gtttggaatatggcatttgacttcattcttgacaatgttcaggtggttttacaacaaact
tatggaagcacattaaaagttatctga

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