Trachemys scripta elegans (red-eared slider): 117873449
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Entry
117873449 CDS
T07347
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117873449 (TRAPPC8)
Membrane trafficking [BR:
tst04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117873449 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
117873449
NCBI-ProteinID:
XP_034618716
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All DBs
Position
2:complement(208661147..208769540)
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AA seq
1473 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRKNNLGFSELVKPFCRLTSEVHMRDPNN
QLHVIKNLKIAVNNIITHSPQPGGIRKLLNDVVSVSQPAEGLVTNVITAGDYDLNISDRS
VKASVPWYNNWKDTLMELNTSTFYSATTPWFESYRESFLQSMPASDHEFLNHYVACMLVV
SSGEPEPVEQFLKLSQEQHRIQHSSEYAYPKWFIPNTLKYYVLLHDVSAGEEQRADSVYE
EMKQRYGTQGCYLLKINSRGSNRGADEQIPDPWSQYLQKNSIQNQESYDDGPYTVISNKN
ADHLISDGLDNDIQVDGLSNNFKAHPLQLDHLSDTSSSFDGTDYIKTTSSLHESKKTSSG
TPHGACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWF
SGSKVPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLND
QAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDICKNMVLAERCVLLSAEIL
KSQSKYSDAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRYSK
AGQKKHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSK
QPAAQQGTFLREYLYVYKNVTQLSPDGPLPQLPLPYINNSATRVFFGHDRRPAEGEKQAA
THISLDQEYDCESSHQWKELEEQVVAVVNKGIIPSNFQPTQYCLNSYSDNSKFPLAVVEE
PVTVEVAFRNPLKVPLLLTDLSLLWKFQSKDFSAKHNGATKELACGNDMIGAEVIAEFLI
NSEETKMARLKLFPHQTGELHVLGVVYNLGTIQGTMMLDGIDPSIGLQAGKLVYNGMSVR
GRQDLEIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKA
YVEFVNVSKCPLTALKVVSKHPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDSTSVCT
ALMSSASSVNFGLGTGSQPEVIHVPLPDSVLLPGASIQLPMWLHGPDEEGVHEINFLFYY
ESIKKHSKMCHRVLRHTAVICTSRSLNVRATVCRSNALEDEGKGDNMLVFVDVENINTSE
AGVKEFHIVQVSSNSKHWKLQKAVNLSEDKDYKLASRERGKLCFKAVRCKNSGENYTFAD
IVFGNEQIISSASPCADFFFRSLSSELKRTHAQSNMFQGAAKQSFDEAVRLIQKCSEVDL
NIVVLWKAYVVEDNKQLILEGQHHVVLHTVGKEAFSFPQKQGFKKILGNSDWEDLEQESS
EMVLLKFFRPENTSLPTRPTPEQLSNLIKTSLHYPESFNHSFHQKSLCLVPVTLLLSNCS
EADVDVIIDLRHKTTSPEALEIHGSFTWLGQTQYKLQLKSQEVYSLQLKACFVRTGVYNL
GTHRVFAKLADQVTLFETSQQNSMPALIIISNI
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagagactcacccgcaagaacaacctgggcttctcc
gagctggtgaagcccttctgccgcctcacctcggaagttcacatgagagatcctaacaac
cagcttcacgtaattaaaaacttgaaaattgctgtcaacaacattattacccactcacct
cagccaggaggcattcggaaacttctaaatgatgttgtatctgtcagtcaaccggctgaa
ggattagtaactaatgtgattactgcaggagattatgatctcaacattagtgatcgctca
gttaaagctagtgttccttggtacaataattggaaagacacactgatggaactgaacaca
tccacgttttattcagctactactccatggtttgagtcttacagagagagctttcttcag
tccatgcctgcatcagatcatgaattcctaaaccactatgtcgcatgtatgcttgtagtt
tcttctggtgagcctgaacctgtggagcaatttctgaagctgtcacaagagcagcataga
attcagcacagcagtgaatatgcatatccaaaatggtttataccaaacacactcaaatat
tatgtattgctacatgatgtaagtgcaggagaggaacaaagagctgactcagtatatgaa
gaaatgaaacagagatatggaactcagggttgctatttacttaaaataaattctcgagga
tctaacaggggtgcagatgaacaaataccagatccttggagtcagtatctccagaaaaac
agtatccaaaaccaggaatcttatgatgatggtccatatactgtaatttcaaataagaat
gctgaccacttaatatcagatggcttagataatgacatccaagtagatggtttatcaaat
aactttaaggctcaccctcttcaactggatcatctgagtgatactagtagcagttttgat
ggcactgattacataaagactacttcatcactgcatgaatcaaagaagacaagttctgga
acacctcatggtgcatgtttaacgctcacagatcatgatcgaattagacaattcatacag
gagttcacatttagggggcttttgccacatatagagaaaacaattcgacagcttaatgat
cagttaatatccaggaaaggtttgagtcgatcactattttctgcaacaaaaaaatggttt
agtggcagtaaagttccagagaaaagtataaatgagctgaaaaatacatctggattgttg
tatcccccagaagcaccagagcttcaaatcaggaaaatggcagatttgtgtttcttggtc
caacactacgaactggcgtatagctgctatcatacagcaaagaaagactttttaaatgat
caagcaatgctttatgcagctggagcactggaaatggcagcagtatcagcttttcttcag
cctggggcgcctagaccgtaccctgctcattatatggatacagcaattcaaacatatagg
gatatctgcaagaacatggtgctggctgagagatgtgtgctgcttagtgctgaaatttta
aaaagccagagcaaatactcagatgctgctgctcttctgatacgtttaaccagtgaggat
tctgaccttcgcagtgcccttctgttggagcaggctgcacattgctttataaacatgaaa
agtcctatggttagaaagtttgcctttcatatgatattggctggccataggtatagcaaa
gcaggacagaagaaacatgccttgcgttgttattgtcaagccatgcaagtttacaaaggg
aaaggttggtctcttgcagaggatcatattaacttcacaattggtcgtcagtcttttaca
cttcgtcagcttgataatgctgtgtctgccttccggcatattttgatcaatgacagcaaa
caacctgctgctcaacaagggaccttcctcagagaatacctttatgtttacaagaatgta
actcagttatcacctgatggccctttaccacaacttcctttaccatatattaacaattct
gcaacacgagtattctttggacatgatagacgaccagcagaaggtgaaaagcaggcagcc
acacacataagtcttgatcaggaatatgattgtgaatcttctcaccaatggaaggagctt
gaagaacaggttgtggctgtggttaacaaaggaataataccttcaaactttcaaccgacg
cagtattgtttgaacagctattcagataactccaagtttccacttgctgtagtagaagaa
ccagtaacagtggaagtagcctttagaaatccattgaaggttccacttttgttgactgat
ttatcgttgctttggaaattccaatctaaagatttcagtgcaaagcataatggagcaaca
aaagagttggcatgtggaaatgacatgataggagctgaagtaatagctgaattcttaatt
aatagcgaagagacaaaaatggcaagactaaagctctttccccatcaaacaggggagcta
catgttctgggagtcgtttacaatcttggcactattcagggtactatgatgttagatggg
attgatccttctattggattgcaagcaggaaaattggtctataatgggatgtctgtacga
ggacgacaggacttagaaattcagggccctcgacttaataatacaaaagaagaaaaaaca
tcgattaaatatggaccagatagacgtttagatcctattataactgaggaaatgcccttg
ttggaggtattctttataaattttcctacagggctgctctgtggagaaatcagaaaagca
tatgtagaatttgtgaatgtgagcaagtgtcctcttactgcactgaaggttgtatcaaaa
catccagaattttttacttttggtggaaatactgctgttctaacaccactgagtccatca
gcttctgaaaactgtagtgcttacaagactgttgtgacagattctacctctgtatgcaca
gcactgatgtcatcagcttcttctgtaaactttgggcttggcacaggaagtcagccagag
gtgatacatgtcccacttcctgactctgtccttctccctggggcttcaatccagctgcca
atgtggttacatggaccagatgaagaaggggttcatgaaataaactttttgttttactat
gaaagtattaaaaaacactcaaaaatgtgtcatagagtattaagacacactgcagttatt
tgtaccagccgatctttgaatgttcgagctactgtctgcagaagtaatgcccttgaggat
gaaggcaaaggggacaatatgctggtgtttgtggatgtggaaaatatcaatactagtgaa
gctggtgttaaagaatttcatatagtacaagtatcaagtaacagcaaacactggaagtta
caaaaagctgtaaatctctctgaagacaaagattataaacttgccagtagagagagagga
aagctatgctttaaagcagtaagatgcaaaaactctggagaaaattacacatttgcagac
attgtctttggaaatgagcagataatcagttcagctagtccatgtgcagacttttttttc
cgaagcttatcctccgaattaaaaagaacacatgcacaatcaaatatgtttcaaggagct
gcgaaacagtcatttgatgaggcagtcagattgatacaaaaatgtagtgaggtggatttg
aatattgttgttctctggaaggcatatgttgtggaagacaacaagcagcttattttagaa
ggccagcatcatgttgttcttcatacagtagggaaggaggctttttcctttccacaaaag
cagggttttaaaaaaatactcgggaattctgattgggaggacttggaacaggaatcatca
gaaatggttctcttaaagttttttcgaccagaaaacacttcactacccacaagaccaaca
ccagaacagctttctaaccttatcaagactagtcttcattatccagagtcctttaatcac
tcatttcatcagaaaagcctttgtttagtacctgtcactcttctactttccaattgttct
gaggctgatgttgatgtaataattgacttgcggcataaaacaacaagtccagaagcacta
gaaatccatggttctttcacgtggcttgggcaaacacagtacaaacttcagcttaaaagc
caagaggtctacagcttgcagttgaaagcttgctttgttcgtacaggagtctataatctt
ggaactcacagagtatttgccaaattagccgaccaagttactttgtttgaaacaagtcag
cagaactccatgccagcactgatcatcatcagtaacatttga
DBGET
integrated database retrieval system
