Trachemys scripta elegans (red-eared slider): 117873894
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Entry
117873894 CDS
T07347
Symbol
BOP1
Name
(RefSeq) ribosome biogenesis protein BOP1
KO
K14824
ribosome biogenesis protein ERB1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117873894 (BOP1)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117873894 (BOP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
ANAPC4_WD40
NBCH_WD40
MIOS_WD40
MRC1
Motif
Other DBs
NCBI-GeneID:
117873894
NCBI-ProteinID:
XP_034619670
LinkDB
All DBs
Position
2:280879338..280978151
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AA seq
731 aa
AA seq
DB search
MERAGGSRRLSSPSTQVLEEQAQESDDLTDSEESVYSGLEDSGSDSSTEEEAEDQDSGDE
GTLKGSLLSKKAQARMASPKKEQVQCRSLETKSMPSVQQGLLLRGEYEDDSSDEEDVRNT
VGNIPMEWYQDYPHIGYDLDGKRIYKPIRTKDELDKFLDQMENPDYWRTVQDKQTGVDVR
LTDEQVELVQRLQKGQFGDVHLNPYEPAIDFFSSQVMIHPVTNRPADKRSFIPSLLEKEK
VSKLVHAIKMGWIKPRKPKEDTPTYYDLWAQEDPNSILGRHKMHVPAPKLRLPGHEESYN
PPPEYLLSEEEKLAWEQQEAAERKLNFLPQQYRCLRAVPAYPRFIHERFERCLDLYLCPR
QRKMRVNVDPEDLIPKLPKPRDLQPFPTTQALVYRGHTGLVRCLSISPSGQWLVSGSDDG
TVRFWEVSSARCMKTLPVEGVVKSVAWNPNPAVCLVAVAVEQSVLLVNPCLGDKLLYGAT
DQVIEAYEPPEEERLQPVTWAVAAGAEHTRGVRLIIRHGKPVKQVTWHPRGDYLASVLAD
DGHTQVLIHQASKRWSQSPFRRSKGQVQCVLFHPLRPFFFVATQRYVRLYNLLKQELAKK
LLTNCKWVSSMAVHPAGDNLICGSYDSKLAWFDLDLSTKPYRVLRHHKKALRSVAFHKHY
PLFASGSDDGSVIVCHGMVYNDLLQNPLIVPVKVLKGHTPARDLGVLDVLFHPTQPWLFS
SGADATIRLFA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggcgggggggagccgccggctgtccagtcccagtacccaagtgctggaggag
caagcccaggaaagcgatgacctgacagacagcgaagagagcgtctactctgggctggag
gattctggaagtgacagcagcacggaggaggaggcagaggaccaggacagcggtgatgag
gggacgctgaaaggcagtttgctctcaaagaaggcacaagccaggatggcttccccgaag
aaggaacaagtgcagtgccggagtttggagaccaagtcaatgcccagcgtccagcaggga
ctgctgctgaggggcgaatacgaggacgacagctcagacgaggaggacgtgcgtaacacg
gtgggcaacatccccatggagtggtaccaggactacccgcacattggctacgacctggac
ggcaagaggatctacaagccgatccgaaccaaggacgagctggacaagttcctggaccag
atggagaaccccgattactggcggacggtgcaggacaagcagacgggggtggacgtgagg
ctgacggacgagcaggtggagctggtgcagcggttgcagaaagggcaattcggagacgtg
caccttaacccctatgagccagccattgacttcttcagcagccaggtgatgatccacccg
gtgacgaaccgcccggctgacaagcgcagcttcatcccctccctcctggagaaggagaag
gtctccaagctggtccatgccatcaagatgggctggatcaaacctcgcaagcccaaggag
gacacgcccacctactatgacctctgggcccaggaggaccccaactccatcctggggcgc
cacaagatgcacgtgccggccccaaagctgcggctgccgggccacgaggagtcgtacaac
cccccgcccgagtacctgctgagcgaggaggagaagctggcctgggagcagcaggaggcc
gcggagcggaagctgaacttcctgccccagcagtaccggtgcctgcgcgcggtgccagcc
tacccccgcttcatccacgagcgcttcgagcgctgcctcgacctctacctgtgcccgcgc
cagaggaagatgagggtgaacgtggacccggaagacctgatccccaagctgccgaagccg
cgggacctgcagccgttccccaccacgcaggccctggtctaccgcgggcacaccggcctc
gtgcgctgcctcagcatctcccccagcgggcagtggctggtgtcaggctccgatgacggc
acggtgcggttctgggaggtgagcagcgcccgctgcatgaaaaccctcccggtggagggc
gtggtgaagagtgtcgcctggaaccccaaccccgccgtctgcctggtggccgtggctgtg
gagcagtccgtcctgctggtgaacccctgcctcggggacaagctgctgtacggggccacg
gaccaggtgattgaggcctacgagccgccggaggaggagcggctgcagcccgtcacctgg
gctgtggcagccggcgccgagcacaccagaggcgtccgtctcatcatccggcacgggaag
cccgtgaagcaggtgacctggcaccccagaggcgactacctggccagcgtcctggctgac
gacggccacacgcaggtgctgatccaccaggccagcaagcgctggagccagagccccttc
cgccggagcaaggggcaggtgcagtgcgtcctcttccacccgctgcggcccttcttcttc
gtggccacccagcgctacgtccgcctctacaacctgctcaagcaggagctcgccaagaag
ctgctgaccaactgcaagtgggtgtccagcatggccgtccaccccgcaggagacaacctg
atctgtgggagctacgacagcaaactggcctggttcgacctggacctgtccaccaagccc
taccgcgtgctgaggcaccacaagaaggcgctgaggagtgtggccttccacaagcactac
cccctcttcgcctcaggctcggacgacgggagcgtcatcgtctgccacggcatggtctac
aatgacctgctgcagaacccgctgatcgtgcccgtgaaggtgctgaagggccacacgccg
gcccgggacctgggcgtgctggacgtcctcttccatcccacccagccctggctcttctcc
tcgggcgccgacgccaccatccgcctcttcgcgtaa
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