Trachemys scripta elegans (red-eared slider): 117876195
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Entry
117876195 CDS
T07347
Symbol
NRDE2
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117876195 (NRDE2)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117876195 (NRDE2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
TPR_19
Motif
Other DBs
NCBI-GeneID:
117876195
NCBI-ProteinID:
XP_034623994
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Position
4:31766324..31846994
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AA seq
1200 aa
AA seq
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MLGQRAAPSCLVGRPGSPWEARGEEAVVQSMALFPAFAGAVEPGETPASGSEGSRRELDW
LSNPSFCTEDALNLHQRTAKAADLTPERSQLIRSPSRSELSGGSDTNEDLKKSTKKRKGK
KKKHHHHKKRKKKTREESSNSESDSDSECMKDKPRGSDTNHEREAATLNLEDITSNGATS
RFVWLEDILALTAETFRTDKNPDPANWEYKSLYRGDIARYKRKGDSCLGIDLKKQCITWE
SSMVEKKQSHKRPERYFTKNSVQLLSTDGIPVYSKSQTTSSGLSTFIPLSQLDSDAPPTT
TYVNPLGIYDPLTTLWLQGKGPSEHETLKQQASQETSENVNSVLIAKVEEYNRTVRENPR
DVHTWMEFVSFQDEIMRGPSPYAIKEGEQEIRRKSFKLILEKKLAILERAIESNPNDVDL
KLAKLKLCTEFWEPSTLIKEWQKLVFLHPNNPVLWQKYLLFCQSQFSTFSVSKVHSLYGK
CLSTLAAVQDGSMVSHPVLPGTEEAMLAVFLQQCHFLRQAGHSEKAVSLFQALVDFTFFK
PDSVKDLPTRGQVEFFEPFWDSGEPRFGEKGAKGWKSWMHQQEKGGWIIINKPDEDEEDV
DEDQEIKDKTLPKWQIWLDIECSRETRHWLPWRPDKTKKQTEEDCEDPERQVLFDDLGPS
LIRLSSPDLQFQLLYSFLQFVGVPCGCSLFPSNLYIAMDENNIFDTGQSEKPLTSFDSLL
SGVNSIGHMDTMTRGRQRMGHCKEGEEFIQNVFHLILPLFSGKEKSHLSVCWLQYEISKV
VQCLQAKNKKKLKSQGKKSKKLAKNLLKASENRNNLSLWKLYAYLEWLLGNTEDARKVFD
TALCLAGTEGMRNTQLCNLSLLYASLEVELLESLEETVMSRALHILTKLAESGPYVPYTG
QVLSVNILKARKAYEHALQDYLNESPVSNWDQASSSSQLVSLVGCYALFQYLTVGIDAAV
LICRRISEKLKGSTSQKFESIGENLGIHNFPTALEAVTLMHTNLLRYHMKVSIYPLNPLR
EALTEALKLYPSNQSLWRSYIQIQSKSHNASKARRFFDSVTRSTKSLEPWLFAIQAEEMR
KKLVENVQRVDVGEIHSTIPETGLTNRIKALFEHAIQSENGAHCPLLWRMYLNFLFSLGN
KERSKGLFYRALQNCPWAKVLYMDAIEYFPDQLQETLDLMTEKELRVRVPIEELELLLED
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgctggggcagcgagcggcgccatcttgcctcgttgggcggccggggtctccttgggaa
gcaagaggggaggaagctgtggttcagtccatggctcttttcccggcctttgccggcgcc
gttgagcccggggagacaccagccagcggtagcgagggctccaggagagaattggactgg
cttagcaatccaagcttctgcacagaagatgcactgaatctgcaccagcgcactgcaaag
gctgcagatcttactcctgagagatcacaacttataaggagtccttcaagatcagagctc
tcaggaggaagtgataccaatgaagatctaaaaaaatcaactaagaaaaggaaagggaaa
aagaaaaagcatcatcaccacaagaaaagaaagaagaaaaccagagaggaatcaagtaac
agtgagtcagactcggacagtgagtgtatgaaggataaacctagaggaagtgacacaaac
catgaaagagaagcagcaacattgaatctagaagacataacatcaaatggtgccaccagt
cgctttgtttggcttgaggatattctggctttgacagcagaaaccttcagaacagacaag
aatccagaccctgcaaactgggaatacaagtcactgtatcgaggggacatagcaagatac
aagcggaaaggtgactcatgccttggtattgacctaaagaaacaatgtataacttgggaa
agttccatggtagaaaaaaaacagtcccacaagcgacctgaacgctacttcacgaagaat
agtgtgcagttattgagcacagatggaattcctgtttacagtaaaagccaaactacttca
tctggtctaagcacttttataccgctctcacaactggacagtgatgctcctcctacaaca
acgtatgtgaaccctcttgggatttatgatccattgaccacactctggttgcaaggaaaa
ggtccctcagagcatgagactttaaagcagcaggcgtcccaagagaccagtgagaatgtt
aactctgttctaattgcaaaagtggaagaatataataggacggtcagagaaaatccaaga
gatgttcacacttggatggaatttgtttcttttcaggatgaaataatgagaggacccagc
ccttatgccatcaaagagggagagcaggaaataaggagaaaatcattcaagctaatccta
gaaaagaaactggccattttagagagagctattgaaagcaatccaaatgatgttgatctg
aaacttgccaagctgaagctttgtacagaattctgggaaccatcaactttgatcaaagaa
tggcagaaactggtttttttgcatcccaataatccagtcttgtggcagaaatatctctta
ttttgtcaaagtcagttcagcaccttttcagtttcaaaagtccatagtttatatggaaaa
tgtttgagcactttggcagctgtacaggatggcagcatggtgtcacatcctgtactgcct
ggcacagaggaagctatgttagctgtctttcttcagcagtgccattttcttagacaggcg
ggccattctgagaaagctgtgtctttgttccaagccctggttgatttcaccttctttaaa
cctgacagcgtaaaagatctgccaacaagaggacaggtggagttctttgaaccgttttgg
gatagtggagagcctcggtttggagaaaaaggagcaaaaggctggaaatcatggatgcat
caacaagaaaagggaggctggattatcatcaataaacctgatgaggatgaggaagatgta
gatgaagatcaagaaataaaggataaaactctacctaaatggcaaatttggctggacatt
gaatgttcccgtgaaacaaggcattggctgccttggcgacctgacaaaactaaaaagcag
actgaagaagattgtgaagacccagagagacaggtattgtttgatgatcttgggccatct
ttaatcagactttctagtccagatcttcagtttcagctgctatactcatttctgcaattt
gtgggagtcccatgtgggtgtagtctctttccttcaaatctctatatcgctatggatgag
aacaatatttttgacactgggcagtctgaaaagccactgacttcttttgactcactgctt
tctggagtcaatagtattggccatatggacacaatgaccagagggagacagcgcatggga
cactgtaaggaaggagaggagttcatacagaatgtctttcatttaatattgccgttgttt
tcaggaaaggaaaagtcacacctttctgtctgttggctacaatatgaaatctcaaaggtt
gttcagtgtcttcaagcaaaaaacaagaagaaactgaagtcacagggaaagaaaagcaaa
aaactagccaagaatctccttaaggcatctgaaaaccgaaacaacctttccctctggaaa
ctgtatgcttacttggaatggttacttggcaacactgaagatgctagaaaagtgtttgat
acagctctttgcttggcaggcactgaaggaatgagaaatacccaactctgtaatctaagc
ctgctttatgcttcactggaagtggagctactagagagtttggaggaaacagttatgtca
cgtgctttacatatattgaccaaactggctgaaagtgggccatatgtaccttatactggg
caagtgctatctgtgaatatcttgaaagctcggaaggcatatgagcatgcgttgcaagat
tatttaaatgaaagtccagtctctaactgggatcaggccagcagttctagtcaactggtt
agtttagttggttgttatgcacttttccagtatttgactgtggggattgatgctgctgta
ttaatatgtagacgtatttctgaaaagcttaaaggttctacttcacagaagtttgaaagc
attggagaaaatcttggcattcataatttccccactgctcttgaagctgtcacactcatg
cacacaaatttactcaggtaccatatgaaagttagcatttaccctttaaatccactgcga
gaggcactaacggaggctttgaagctgtatcctagcaaccagtctctttggaggtcatat
atccagatccaaagcaagtctcacaatgctagcaaagcacgaagattttttgatagtgtc
acaaggtctactaagtccctagagccgtggctgtttgcaatccaagcagaggagatgaga
aagaagcttgtcgagaatgttcagagagtagatgttggagaaatacattcaacaattcct
gaaactgggttaacaaatcggatcaaagctctatttgaacacgcaattcagagtgaaaat
ggtgcccattgtccattgctgtggagaatgtatttgaactttctgttttctctaggaaat
aaagaaaggagcaaaggactgttttatagagcccttcagaactgtccctgggcaaaggtg
ctgtatatggatgcaatagagtattttccagatcaactgcaagagaccctagatctaatg
actgaaaaagaattgagagtaagggtacctatagaagaactggaattgctactggaagat
taa
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integrated database retrieval system
