Trachemys scripta elegans (red-eared slider): 117876418
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Entry
117876418 CDS
T07347
Symbol
SEC23A
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117876418 (SEC23A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117876418 (SEC23A)
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117876418 (SEC23A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
117876418
NCBI-ProteinID:
XP_034624471
LinkDB
All DBs
Position
4:43512301..43557587
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AA seq
765 aa
AA seq
DB search
MATFLEFIQQNEDRDGVRFSWNVWPSSRLEATRMVVPVASLFTPLKERPDLPPIQYEPVL
CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISEMNQPAELLPQFSSIEYV
VQRGPQMPLIFLYVVDTCMEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGC
EGISKSYVFRGTKDLSAKQLQEMLGLTKVSVSQVGRGPQVQQPPPSNRFLQPVQKIDMNL
TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGAHILMFIGGPGTQGPGM
VVGDELKLPIRSWHDIEKDNANYVKKATKHFEALANRAATTGHVIDIYACALDQTGLLEM
KCCPNYTGGYMVMGDSFNTSLFKQTFQRVFTKDMQGQFKMGFGGTLEIKTSREIKISGAI
GPCVSLNSKGPCVSENEIGTGGTCQWKICGLNPNTTLALYFEVVNQHNAPIPQGGRGAIQ
FVTQYQHSSGQRRIRVTTVARNWADAQTQIQNIAASFDQEAAAILMARLAVYRAETEEGP
DVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILPDRILLMDTFFQILIYH
GETIAQWRKSGYQDMPEYENFRHLLQAPIDDAQEILHSRFPMPRYIDTEHGGSQARFLLS
KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccttcctggaattcatccagcagaatgaagacagagatggagttagattcagc
tggaatgtttggccttcaagtcgccttgaagccacaagaatggtagtcccagtggcttcc
ctctttacaccactgaaagagcgtcctgatttgcctcccattcagtatgagccagttctg
tgcagtaggaccacctgtcgtgcagttctgaatcccttatgccaagtggattatcgagca
aaactctgggcttgcaatttttgttatcaaagaaatcagtttcctcctacttacgctggt
atatcagagatgaaccagcctgcagaacttttacctcagttttctagtattgaatatgta
gtacagcgtggtcctcagatgcctttgatatttctttacgttgtggacacatgcatggaa
gatgaagatttgcaagccctgaaggaatccatgcaaatgtcattaagtctcttaccacca
actgctttggtagggcttattacatttgggagaatggtgcaggtccatgagcttggttgt
gaaggaatttcaaaaagctatgtcttcagaggcacaaaggacctatctgcaaaacaactt
caggaaatgttggggcttactaaagtatctgtttcacaagtaggccggggtcctcaggta
cagcagccaccaccttctaacagattcctacagccagtgcagaaaattgatatgaatctt
actgatcttttgggtgaattacaacgggatccttggcctgttccacaagggaaaagacct
ttgcgttcctctggagtggctctttctatagctgtaggactccttgagtgtactttccct
aacactggtgcacatatattgatgttcattggagggccaggcactcaaggacctgggatg
gttgtaggggatgaactgaagttacctataagatcatggcacgacattgaaaaagacaat
gccaattatgttaaaaaggctactaagcattttgaagctctggctaatcgtgctgctaca
actggtcatgttattgacatatatgcatgtgcactagatcagactggtcttctggagatg
aagtgctgtcccaactatactggaggctacatggtaatgggagactctttcaatacatcc
ttattcaaacaaacctttcagagagtatttaccaaagatatgcaagggcaatttaaaatg
ggatttggtggcactttagaaataaagacctcaagagaaatcaagatttcaggagctatt
ggaccctgtgtctctcttaattccaaaggaccttgtgtgtcagaaaatgagataggaaca
ggaggtacgtgtcaatggaagatctgtggccttaatcccaatacaacacttgcgctgtat
tttgaggtggtcaatcagcacaatgctccaattcctcaaggtggacgtggtgcaatccag
tttgtgactcagtaccagcattcaagtggacagagacgtatcagagtaaccacagttgcc
agaaactgggcagatgctcagacacagatccaaaacatcgctgcttcttttgaccaagag
gcagctgccattcttatggccagattggcagtttatagggcagagacagaagaaggacct
gatgtacttaggtggctggacagacagctgatacgactgtgtcagaaatttggagaatat
cacaaagatgatccaagctccttcagattttcagaaaccttctcactttatccacagttt
atgtttcacttaaggagatctcctttcttgcaagtctttaacaacagccccgatgagagt
tcatactatcgacatcatttcatgcgtcaagatctaacccagtcacttatcatgattcaa
ccaatcctctatgcctactctttcagtggacctccagagcctgttcttcttgatagcagc
agcattttgccagatcgcattcttcttatggacacctttttccagatccttatttatcat
ggagagaccatagctcagtggcgcaagtcaggctaccaagacatgccagaatatgaaaat
ttccgccatcttttacaagctccaatagatgatgcccaggaaattctccattccagattc
ccaatgccccggtacattgatacagagcatggaggaagccaggcccgcttcctgctttct
aaagtcaatccctctcagactcacaacaacatgtatgcctggggacaggagtctggcgca
cccattctgactgatgatgtcagcttgcaagtctttatggatcatctgaagaaacttgcc
gtctccagtgctgcctaa
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