Trachemys scripta elegans (red-eared slider): 117876914
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Entry
117876914 CDS
T07347
Symbol
NRCAM
Name
(RefSeq) neuronal cell adhesion molecule
KO
K06756
neuronal cell adhesion molecule
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117876914 (NRCAM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Pur_ac_phosph_N
C2-set_2
SIT
fn3_2
INCA1
Motif
Other DBs
NCBI-GeneID:
117876914
NCBI-ProteinID:
XP_034625341
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Position
1:51519228..51706814
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AA seq
1315 aa
AA seq
DB search
MMTKKSRSASRASLILFLCQMITALEVPLDPILLKELSQPPTITQQSPKDYIVDPRENIV
IQCEAKGKPPPSFSWTRNGTHFDIDKDARVTVKPNSGTLVINIMNGGKTEAYEGVYQCTA
RNERGAAISNNIVIRPSRSPLWTKEKVEPKHVREGDPLVLHCSPPVGLPPPIIFWMDNSF
QRLPQNERVSQGLNGDLYFSNVKPEDTREDYICYARFNHTQTIQQKQPISVKVFSMDSLN
ETISANLSDTDFYGAKPLTERRPTLLTPLGSTSNKVELRGNVLLLECIAEGLPTPVIRWI
KEGGELPINRTFFENFKKTLKIIEVSEADSGKYKCVARNPLGSTHHTITVTVKAAPYWIT
APRNLVLSPGEDGTLICRANGNPKPNISWLTNGVPIAIAPEDPSRKVDGDTIIFSDVQER
SSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQVIANNPALLDCAFFGSPVPE
IEWFKGVKGSILRGDLYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKVQNEVHLEVKDP
TMIIKQPEYKIIQRGGQVSFECTIKHDPTLIPTIMWLKDNGELPDNERFIIHKDSLAIMN
VTDKDDGTYTCVANTTLDSVSASAVLTVVDRPNPPFDLELTDQLERSIQLSWIPGYDNNS
PITNFVIEYEDGMHEPGVWHYQTEVRGTQTTVQLKLSPYVNYSFRVIAVNEIGRSQPSEA
SEQYLTKAAKPDENPSGVQGIGSEPDNLVIIWEPLKGFQSNGPGLQYKVSWRQKDVGDEW
TSVIVANVSKYIVSGTPTFVPYEIKVQALNDLGYAPEPAEVIGHSGEDLPMVAPGNVQVH
IVNSTLAKVHWDPVPLKTVRGHLQGYRIYYWKVQSLSKRRRRHVEKKILTFSGNKTHGML
PGLEPYSSYKLNVRVVNGKGEGPASPDKLFKTPEGVPSAPSFLKITNPTLDSLTLEWGPP
THPNGVLIAYTLKFQPINSTHELGPLVEIRIPANETSLILSNLNYSTRYKFYFYAQTSVG
AGNQITEEAVTIMDEAGILPPAVGAGKGYSETLFATSPVIHTVHLTFYKVRPVYPRIRNV
TASAAETYANISWEYEGPDHVNFYVEYGVAGSKEDWKKEIVNGSRSFFVLKGLTPGTSYK
VRVGAEGLSGFVSSEDVFETGPAMASRQVDIATQGWFIGLMCAVALLILILLIVCFIRRN
KGGKYPVKEKEDAHADPEIQPMKEDDGTFGEYRSLESDAEDHKPLKKGSRTPSDRTVKKE
DSDDSLVDYGEGVNGQFNEDGSFIGQYSGKKEKEPAEGNESSEAPSPVNAMNSFV
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaaaaaagagcagatctgcaagcagagcttccctgattctctttctgtgccag
atgattactgcattggaagtacctcttgatccaatacttctcaaagaattatcacagcct
ccaacaataactcagcaatctccaaaagactacattgttgaccctcgagagaatattgta
atacaatgtgaagcaaaaggaaagccacctcctagtttctcatggacccgtaatggaact
cattttgatatagataaagatgcacgggtaacagtgaagccaaattcaggaacccttgta
ataaacattatgaatggtggaaagacagaagcatatgaaggagtatatcagtgtacagca
aggaatgaacgtggagcagcaatttccaataacattgttatacgcccatccagatccccc
ttgtggactaaagaaaaagtagaaccaaaacatgtcagagaaggtgatcctctagtactt
cactgcagccctccagttggcttaccaccacctataatattttggatggataattctttc
caaaggctgcctcaaaatgaaagagtttcccaaggtctaaatggagacctttatttttct
aatgtaaaaccagaggacactcgtgaggactatatttgttatgcgagatttaatcacact
cagactatccagcagaagcaacctatttctgtgaaggtgttctcaatggattcattgaat
gaaactatatctgctaatttgagtgacactgatttttatggtgccaagccattgacagag
agacgaccaactcttttaactccgttggggagtacaagtaataaagtggaactaagggga
aatgtacttttgctggagtgcattgcagaaggattacccacaccagttatccgctggatt
aaagaaggtggagaactgcccatcaacagaacattttttgaaaattttaagaaaactctc
aaaatcatagaggtttctgaagctgattctggaaaatacaaatgtgtagcaagaaatcca
ttaggttccactcaccataccattacagtaactgtcaaagctgctccatactggatcaca
gcacctagaaaccttgtgttgtctcctggagaggacggaaccctgatctgcagagctaat
ggcaaccccaaacctaatattagctggctaacaaatggtgtgcccatagcaattgcccca
gaagatcctagcagaaaagtagatggtgataccattattttctctgatgtgcaagaaaga
tcaagtgctgtttatcaatgcaatgcctctaatgaatatggatacttgctggcaaatgca
tttgtgaatgttttggctgagccaccaagaattctgactcctgctaataaattatatcaa
gtcattgcaaacaatcctgcgttgctagattgtgctttttttggttcacctgtgcctgaa
attgaatggtttaagggagtaaaagggagcatcctgcgcggagatctttatgttttccat
gacaatggaactctggaaattcctgtggcacaaaaggatagtactggtacatatacctgt
gtagcaaggaataaattaggaaaggtacaaaatgaggttcatctagaagtcaaagatcca
acaatgattattaaacagcctgaatacaaaatcattcaaaggggtggccaggtttccttt
gagtgtactataaagcacgatcctaccttaataccaactattatgtggttgaaggataat
ggtgaactgccagataatgaaaggtttattattcataaagatagtttggccattatgaat
gtaactgataaggatgatggaacctatacatgtgtagcaaatactaccctggacagcgtt
tctgcaagtgccgtactcactgttgttgatcgtccaaatccaccctttgatttagaatta
acagatcagctagaaagaagcatacagctgtcctggataccaggctatgacaataacagc
cccattacaaattttgtcattgaatatgaagatggaatgcatgaaccaggggtatggcat
taccagacagaagtccgtgggactcagacaactgtacagttaaagctgtctccatatgtt
aactattcattccgtgtaatagctgtcaatgagattggtagaagtcagccaagtgaagca
tctgaacaatacctaacaaaagctgcaaagccagatgaaaatccttccggtgttcaaggg
ataggatcagaacccgataatttggtgattatatgggagcctttaaaaggttttcagtcc
aatggacctggtcttcaatacaaagtcagttggcgtcagaaagatgttggtgatgagtgg
acttctgttatagttgcaaatgtttcaaaatatattgtatctggtacaccaacctttgtt
ccatatgagataaaagtacaggctttaaatgacttaggatatgcaccagaacctgcagag
gtgattggacattctggggaagacttaccaatggttgctccaggcaatgtgcaggtgcac
attgttaacagcacattagccaaggtgcactgggaccccgttccactaaaaactgtccga
ggacaccttcaaggatacaggatttactactggaaagtacagagtttatctaaaagaagg
cggcggcatgtggagaaaaagattctgacattcagtggaaacaagacacatggaatgttg
ccaggactggagccttatagttcttacaagctgaatgttagagttgttaatggtaaaggg
gaaggaccagcaagccctgacaaattatttaagactcctgaaggagttcctagcgcacct
tcctttttgaagattactaatccaacactggactctctcactttggaatggggtccacct
actcacccaaatggtgttttgatagcgtatacactaaagtttcaaccaattaacagcact
catgaattaggccccttggtagagatcagaattcctgcaaacgagaccagcttgatatta
agtaatttaaattacagcacacgatacaagttttacttttatgcacaaacatcagttgga
gctggaaatcaaataactgaggaagcagtaacaattatggatgaagctggtattctccct
cctgctgtaggtgcaggcaaaggatactcagaaaccctttttgcaacctcccctgtcata
catactgtccatctaacattctataaggttcgaccagtttatccaaggatcagaaatgtt
actgcatctgctgctgagacctatgccaatatcagttgggagtatgagggaccagatcat
gtgaacttttatgttgaatatggtgtagcaggcagcaaagaagattggaaaaaagaaatt
gtaaatggttctcggagcttctttgtgttaaagggtttaacaccaggaacgtcatataaa
gtccgggttggtgctgagggtctgtctggttttgtgagttcagaggatgtgtttgagaca
ggtccagcaatggcaagccggcaggttgacattgctactcaaggatggttcattggtctt
atgtgtgctgttgctcttcttatcttgattttgctgattgtttgcttcataaggaggaat
aagggtggcaaatatccagtgaaggaaaaggaagatgcacatgctgatccagaaatacag
cctatgaaagaagatgatggaacgtttggtgaatacaggtctcttgaaagtgacgcagag
gatcataaacctctaaagaaaggaagccgaacaccttcagacaggactgtgaaaaaggag
gacagtgatgatagtttagttgactatggcgaaggtgtaaatggtcagttcaatgaggat
ggctcctttattggacaatacagtggtaaaaaagagaaagaacctgcagaaggaaatgaa
agttctgaggctccttctcctgtcaatgccatgaattcctttgtttaa
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integrated database retrieval system
