Trachemys scripta elegans (red-eared slider): 117877161
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Entry
117877161 CDS
T07347
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117877161 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117877161 (USP47)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117877161 (USP47)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117877161 (USP47)
Ubiquitin system [BR:
tst04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117877161 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
117877161
NCBI-ProteinID:
XP_034625880
LinkDB
All DBs
Position
4:complement(95133875..95239082)
Genome browser
AA seq
1376 aa
AA seq
DB search
MVPNEENQLVPKEDMFWSCRQSLFDEMKKKFSQIESAADEPRVLCIIQDTTNSKTVNERI
TLNLPASTPLRRLFEDVASKVGYVNGTFDLVWGNGINVVDMTPLDQTSDKSILEAGFEVG
KKNFLHLTDKDGEQPHLMSEESGTTDDGNQERFIGPLPREGSVGCTNDYVCQNYSYSSIL
SKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEEAVMSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSGAERISKVGI
EKNSLLYELFSVMVHSGSAAGGHYYACIKSFNDEQWYSFNDQHVSKITQEDIKKTYGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEVNEYPEHIKQLVRKEKELEEQEKKQR
EIERNTCKIKLFCMHPVKQIMMENKLEVHKDKTLKEAVEIAYKIMDIEEAVPLDCCRLVK
YDEFHDYLERSFEEEEEDIPMGLLLGGVKSTYMFDLLLETRTPDQVFQCYKPGEVMVKVH
VVDLKTESVAPSISVRAYLNQTVTEFKQLISKAVRLPAETMRVILERCYNDLRLLNVGNK
TLKAEGFFRSNKVFVESSESLDRQMAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFKR
TVNQKASGDSGNLDEACARVKGTLGNMRSVEAILEESTEKLKSLSLQQEQEGDNGDSSKS
TEASDFENIESPLNEVDSLASAENRELENQIQISDPENFQSEERSDSDVNNDRSTSSVDS
DILSSSHSSDTLCNVDNAPIPLANGLDSHSITSSRRSKANEGKKETWDTAEEDSGTDSEY
DESGKSTGEAQYMYFKAEPYAADEGSGEGQKWLLVHVDKRITLSAFKQHLEPFVGVLSSH
FKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLINEPEPCK
FLLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHVYEED
INISSNWEVFLEILDGAEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVDELKEKL
SEISGIPLEYIEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRD
KTEELIELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKESTQD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccaacgaggagaaccagctcgtccccaaagaggatatgttttggagttgcaga
caaagtctctttgatgaaatgaagaagaaattttcacagatagaaagtgctgctgatgaa
cccagagtgctgtgtataatacaagatactaccaattctaagactgtgaatgaacgtatc
actttaaacctgccagcttccactccattgagaaggctgtttgaggatgtggcctccaaa
gtgggctatgttaatggaacttttgatttagtttggggaaatggaatcaatgtcgtggat
atgactcctttggatcaaaccagcgataaatctattcttgaggctggttttgaggtaggg
aagaaaaattttctacatttgacagataaagatggtgaacagcctcatttaatgtcggag
gaatcgggtacaacagacgatggtaatcaagagaggtttataggccctctaccaagagaa
ggctctgttggttgtaccaatgattatgtctgtcaaaactactcatactcttctatcctg
agtaaatcagagacaggctatgtgggattagtaaatcaagcaatgacttgctatttgaac
agcctattgcaaacacttttcatgactcctgaatttagaaatgcattatacaaatgggaa
tttgaagaatctgaagaagaggcagtgatgagcatcccttaccagcttcaaagactgttt
gttttattgcagaccagcaaaaagagagcaattgaaacaacagatgttacacggagcttt
ggatgggatagtagtgaggcatggcagcaacatgatgtacaggagctttgtagagtcatg
tttgatgctttggaacagaagtggaagcaaacagagcaggctgatctcataaatcaactg
tatcaaggcaaactgaaggactatgtaagatgtctagaatgtggctatgagggctggaga
attgacacttacctggatattccattggtcatcagaccttatggctccaaccaggcattt
gctagcgtggaagaagcgttgcatgcgttcattcagcctgagatccttgatggtcctaat
cagtatttctgcgaacgctgcaagaagaaatgtgatgcaaggaagggcttgcggtttctg
cattttccatatctgctgactttacagttgaagaggtttgactttgattacaccactatg
cacaggattaaacttaatgatcgcatgacttttcctgaagagctagacatgagcacattc
attgatgttgaagatgagaagtctccccaaactgagagttgcactgatagtggagcagag
aatgaaggcagctgtcacagtgatcagatgagcaatgatttttctaatgatgatggtgtt
gatgaaggaatctgccttgaaagcaatagtggtgctgaaaggatttcaaaagttggcatt
gaaaagaattctttactgtatgaactcttttctgtaatggtccattcaggaagtgctgct
ggtggccattactatgcctgcataaaatcttttaatgatgagcagtggtatagtttcaat
gatcaacacgtcagcaagattacccaagaagatattaagaaaacatatggtgggtcctct
gggagcagaggctattattccagtgcttttgctagctccacaaatgcatatatgcttata
tacagactgaaggatccaacaagaaatgcaaaatttcttgaagtgaatgaatatccagag
catattaaacaattggtacggaaagaaaaagagttagaagagcaagaaaagaagcaacgt
gaaattgagcgcaatacttgcaagataaaattgttctgcatgcatcctgtgaaacaaata
atgatggagaataaattagaagttcataaggacaagacactgaaggaagctgtagaaatt
gcttacaagataatggatatagaagaagcagttcctctggactgctgtcgtcttgttaaa
tatgatgagttccatgattatttggagcgatcatttgaggaagaggaggaggatatacca
atgggactcttacttggaggagtcaaatcaacatacatgtttgacttacttttggaaaca
agaacacctgaccaggttttccagtgttataaacctggagaggttatggtgaaggttcat
gtagtagacctaaagactgaatctgttgctccttctatcagtgtgcgagcttatttgaat
cagacagttacagaattcaagcaactcatttcaaaggctgtacgtctgcccgctgaaaca
atgcgggtaatactggaacgttgctacaatgacttgcgtcttctcaatgtgggcaacaaa
acgctgaaagctgaaggcttttttagaagtaataaggtcttcgttgaaagttcggagtct
ttggatcgccaaatggcatatacagactcccatttgtggaaacttttggatcgtcatgca
aacacaatcaggctatatgtttcattgccagaacaatctcctgggtctcaatttaaaagg
acagtcaatcaaaaagcgagtggagattcaggcaatttggatgaagcctgtgcaagagtg
aaaggaactctgggtaatatgagatctgtagaggctatcttggaagaaagcactgaaaaa
ctcaaaagcttgtcgctgcagcaagagcaggaaggggataatggagacagtagcaagagc
acagaagcaagtgactttgaaaacattgaatcacctttgaatgaggtagactctttagca
tcagcagaaaacagagaacttgaaaaccaaattcaaatttctgatccagaaaatttccag
tcagaggagcggtcagattctgatgtgaataatgacagaagcacaagttcagtggacagt
gatattcttagttccagtcacagcagtgacactttgtgcaatgtggacaatgccccgatc
cccttggctaatggacttgactctcatagcatcacaagtagtaggagatctaaagcaaat
gaagggaaaaaagaaacctgggacacagcagaagaagattctggaactgacagtgaatat
gatgaaagtggcaagagtacaggagaagcacaatacatgtacttcaaagcagagccctat
gctgcagatgaaggttcaggagaaggacagaaatggttgctggtgcatgttgataaaaga
attacactgtctgccttcaagcaacacttggagccctttgttggagttctctcctctcac
ttcaaggtctttcgagtctatgccagcaatcaagagtttgagagtgttcggctgaatgag
acactttcatcattttctgatgacaataagataactattagacttggaagagcacttaag
aagggggaatacagagtcaaagtgtaccagctcttgataaatgagccagaaccatgcaag
tttcttttagatgctgtttttgctaaaggaatgactgtgcgtcagtcaaaagaggagcta
cttcctcaactcagggagcaatgtggattagatctgactattgacaggtttcgcctacga
aagaaaacctggaagaatccaggcactgtatttctggattatcatgtctatgaggaagat
attaatatttcaagcaactgggaagtcttcttagaaatacttgacggggcagaaaagatg
aaatccatgtcacagcttgctgttctatcaagacgatggaggccatcagagatgaagctt
gattccttccaggaagtagttctggaaagcagcagtgttgatgaattaaaagagaagctt
agtgaaataagtggaatacccttggaatatatagaatttgctaaggggagaggcacattt
ccctgtgatatttcagtactagagatccaccaggacttggactggaatcctaaagtgtct
acattgaacgtctggcctctctacatttgtgatgatggcgcagtaatattttatagggat
aaaactgaagaattaattgaattgacagatgagcagagaaatgaactaatgaaaaaagaa
agcagcagactccagaaaactggacaccgcgtaacctactcccctcgtaaagaaaaagca
ctaaaaatttatctggatggcgccccaaataaagaatcgactcaagactga
DBGET
integrated database retrieval system
