Trachemys scripta elegans (red-eared slider): 117879240
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Entry
117879240 CDS
T07347
Symbol
HNRNPK
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117879240 (HNRNPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117879240 (HNRNPK)
Spliceosome [BR:
tst03041
]
Common components
Common spliceosomal components
hnRNP proteins
117879240 (HNRNPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KhpA-B_KH
MOEP19
DJ-1_PfpI
Bflower
Motif
Other DBs
NCBI-GeneID:
117879240
NCBI-ProteinID:
XP_034630171
LinkDB
All DBs
Position
6:86980005..87006269
Genome browser
AA seq
447 aa
AA seq
DB search
METEQQEETFTNTETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGK
NIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEYQHYKGSDFDCEL
RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIK
IILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPG
RGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRG
RPGDRYDGMMMQCHVDACDDIQPPELTSGSHMQFSMGYMESHGLQFEGGSGYDYSYAGGR
GSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI
TGTQDQIQNAQYLLQNSVKQYADVEGF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaacagcaagaggagacctttaccaacacagagacaaatggaaaacgtcct
gcagaagatatggaagaagaacaggctttcaaaagatctcgcaacactgatgaaatggta
gaactgcgcatcctgcttcagagcaaaaatgctggagcagtgattggaaaaggtggcaaa
aatattaaggcacttcgtacagactacaatgccagtgtttcagtcccagacagcagtggc
cccgagcgcatattgagtataagtgcagatattgaaacaattggagaaattttgaagaaa
attatccctactttagaagagtaccagcactacaaaggaagtgactttgactgcgagcta
aggctgttgattcaccaaagtctggcaggaggaattattggcgtcaagggtgctaaaatc
aaagaactccgagagaacactcagaccaccattaaactttttcaagagtgctgtcctcat
tccacggacagagtagtgcttattggtggaaagcctgatagagttgtggaatgcatcaag
atcatcctggatcttatatcagagtctccaatcaaaggacgggcacagccgtatgatccc
aatttctatgatgaaacatatgactatggtggcttcacaatgatgtttgatgatagaagg
ggacgtccggtaggatttccaatgcgtggaaggggaggctttgatcgaatgcctcctggt
cgtggtgggcgtcccatgccaccatcaagaagagattatgatgacatgagccctcgcaga
ggaccccctcctcctcctccaggtcgtggtggcagaggtggtagcagagcacgtaatctt
cctcttcctcctcctccgcctcctcgtggcggagatcttatgtcttatgaccggaggggc
agacctggagaccgttacgatggaatgatgatgcaatgtcatgtggacgcctgtgatgac
atacaaccaccagaattgaccagtggttctcatatgcagttctctatgggctacatggag
tcacatgggttacagtttgagggtgggtctggatatgactattcttatgcagggggtcgt
ggatcatatggtgatctcggtggacccatcatcacaacacaagtaacgattcccaaagat
ttggctggatctattattgggaaaggaggtcagaggatcaaacaaatacgtcatgaatca
ggggcttcaatcaaaattgatgaacctttagaaggctcagaagaccggataataactatt
acaggcacacaggatcagatacagaatgcacagtatttactgcagaacagtgtgaagcag
tatgcagatgttgaaggattctaa
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