Trachemys scripta elegans (red-eared slider): 117879480
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Entry
117879480 CDS
T07347
Symbol
HEXB
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00511
Other glycan degradation
tst00513
Various types of N-glycan biosynthesis
tst00520
Amino sugar and nucleotide sugar metabolism
tst00531
Glycosaminoglycan degradation
tst00600
Sphingolipid metabolism
tst00603
Glycosphingolipid biosynthesis - globo and isoglobo series
tst00604
Glycosphingolipid biosynthesis - ganglio series
tst01100
Metabolic pathways
tst04142
Lysosome
Module
tst_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
117879480 (HEXB)
09103 Lipid metabolism
00600 Sphingolipid metabolism
117879480 (HEXB)
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
117879480 (HEXB)
00531 Glycosaminoglycan degradation
117879480 (HEXB)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
117879480 (HEXB)
00604 Glycosphingolipid biosynthesis - ganglio series
117879480 (HEXB)
00511 Other glycan degradation
117879480 (HEXB)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117879480 (HEXB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tst03110
]
117879480 (HEXB)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
117879480 (HEXB)
Chaperones and folding catalysts [BR:
tst03110
]
Intramolecular chaperones
Others
117879480 (HEXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
117879480
NCBI-ProteinID:
XP_034630580
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All DBs
Position
6:complement(44571458..44601116)
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AA seq
559 aa
AA seq
DB search
MQGQRRAMEPARLFLGLLAVSAALAASSLHQRPPQPELLLEEEEPELGESPSGSLWPLPR
SLRILPGQFQLAPTRFQLVHGPGSTAGPGCALLQDAFRRYYEYIFGYSKWQNRGQRPLPT
GTELFQLQVIIGSKDSECDNYPTISSNEAYQLSVTQPVAVLRAEKVWGALRGLETFSQLV
YEDDYGSFLINESEITDYPRFAHRGILLDTSRHFLPLKSILTNLDAMAFNKFNVLHWHIV
DDHSFPYQSATFPDLSGKGSYSYDHIYTPTDVRLVIDYARLRGIRVIPEFDSPGHTQSWG
KGQKDLLTPCFNGEHRSGSYGPVNPILNTTYHFMTDLFKEISSVFPDAYIHLGGDEVDFT
CWKSNPDVTEFMKQQGFGIDYAKLESYYIQKILDIVSSTNKGYIVWQEVFDTGVKIKPET
IVEVWIGTLYTAELSRVTGAGFTTILAAPWYLDYISYGQDWKKYYSVEPLNFPGCEKQKK
LVLGGEACLWGEFVDATNLTPRLWPRASAVGERLWSSKNVTNIGDAYNRLVKHRCRMLRR
GIAAEPLFVGYCDHEYRGL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcagggacagcgccgagccatggagccagcccggctgttcctggggctcctggccgtc
tccgcggcgctggccgcctccagcctccaccagcgccccccgcagcccgagctcctgctg
gaggaggaggagccggaactgggcgagtccccctccggctctctctggcctctgccccgc
tcgctccgcattctcccgggccagttccagctagccccgacccgcttccagctagtgcac
ggcccgggctccacggcggggcccggctgcgccctcctgcaggacgccttccgcaggtat
tacgagtacatctttggttattccaaatggcaaaatcggggtcaaagaccgcttcccact
ggcacagagttatttcagcttcaagtcataattggttccaaagactccgagtgtgacaat
tatcccaccatctcgtcgaatgaggcttatcagttaagtgtaacacaacctgtggcagta
ctgagggcagaaaaggtctggggtgcattaagaggtttggaaaccttcagccagttggtc
tatgaagatgactatgggagtttccttatcaatgaatcagaaatcactgactacccaaga
tttgctcacagaggaatcttacttgatacatcaagacactttctacccctcaaaagtatt
cttacaaacctggatgccatggcttttaacaagtttaacgttctccactggcacatagta
gatgaccattcattcccttaccagagcgccactttccctgacttgagtggcaagggctct
tattcctatgatcacatctatactccgactgatgtccgtctggtgattgactatgctcgg
ttaagaggcattagggttatcccagagtttgatagcccaggacatacacaatcttggggg
aaaggtcaaaaagaccttctcacaccatgtttcaatggagagcaccggagtggttcttat
ggacctgtaaaccccattttgaatacaacttatcatttcatgactgacctcttcaaagaa
attagcagtgtatttcctgatgcctacatccacttgggaggagatgaagtggacttcact
tgttggaaatctaaccctgacgtgacagagtttatgaagcagcaaggatttggcattgac
tatgctaaactggaatcttactatattcagaaaatcttggatattgtttcctcaactaac
aaaggatacatagtctggcaggaggtgtttgatacaggagtaaagataaaacctgaaaca
atagttgaagtgtggataggaactttgtataccgcagaactaagccgtgtaaccggagct
gggttcaccacgatcctggcagccccctggtacctagactatattagttacggacaggac
tggaagaaatactacagcgttgagccgctcaacttccctgggtgtgaaaagcagaaaaag
ctggtgctaggtggagaagcctgcctttggggagaatttgtggatgcaactaacctcaca
ccaagattatggcctcgagcaagtgctgttggggagaggctctggagcagtaaaaacgtg
actaacataggggatgcttataacagactagtgaagcatcgttgtcgcatgctcagacgt
ggaatagcagctgaaccactgtttgtcgggtattgtgatcatgaatatagaggcctgtaa
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