Trachemys scripta elegans (red-eared slider): 117880878
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Entry
117880878 CDS
T07347
Symbol
AP5B1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117880878 (AP5B1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117880878 (AP5B1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_N
AP5B1_barrel
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
117880878
NCBI-ProteinID:
XP_034633347
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Position
7:complement(29743274..29747640)
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AA seq
917 aa
AA seq
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MSVRSGESWTQLITTFRAGPTAFLLARGSDDTFLAELLQDLSSERISEQTKVSMLTLLLE
FPTLLCPDPEVGEQVAGSLLANFAQLPHSPKLSWLRRHLLVVVGTVLISTEAFGEGSQAS
RDYLSLLLHLASDLNDQRQGPGDRGVRAAACESLRELECCYPGLFSRRLDSLRSMQQQEL
TPVHQGYTLLYSLALRNAVLLLARRGEGTLSELLAGNEGLAWEAVGNAGAVSPASIDRLL
LLPTPAETKELKSVLSQLLDDSYLLTPPAQGQLLWHLAQVLCVIRTQSPAIFKAQLVRLF
GTAHVALLHASLQLKGLFTDSLFTAEDEAFLLRRLVGMAQHPSLPSPLKLFYLDCLLHFP
ENRPLGSGSEEGLPVLLTPRLASCLFPSLFNDPGTMLARLNLLSLVCLENQGPEAERGVG
YIFEHVLALADTVAGKGGCEATGLFFRAAYLFARYFGSRPQLMAELTGTLVGLYRQRCSL
APNLINLLNETQAVLDDPAWPASLSKALQELTVGMPLLPPWEQELGWHLKLLARVAKESG
VPQGSTLGFLQRLVRLAGAGQLGDWHIGQALLSVCRNLLQHQPPPAMGCQLAELLQDVSL
SYPDVDVQDRARFYYTLLSCLSGDKLGAVLAPGGRLKARTLSSSIMADSENFAAALTVHP
APQPLLQLQREAPAKPTLVPVPAFQPCPADAQEVKDCCRQLLELHSPARLSLTYRLLHTG
SSPERLFCLLLRFERSDNFYEPVPDVCVPCLSTTRPSPVLTLHLQPRCPYPTELAVSALY
TTQTGLTYCSQLEPLQVAFPDIFLPLALPVNWDCESRRHLFDTLWSSLCPDGSGDCAESL
FCWPTTQQPLGVLVQAHFASYVVAEEPGTYKIAIALPPHYHVLLQAQGIQGAARVTIRTD
NWKVLPHLSAYLRKVVE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcggagtggggagagctggacccagcttataacaaccttccgagcaggcccc
acagccttccttctggcccgcgggagtgatgataccttcctggctgagttgctgcaggac
ctgagtagcgagaggatcagtgagcaaaccaaggtctccatgctgacccttctgctggag
ttccccaccctgctgtgcccagaccccgaggtgggtgagcaggtggctggctctctcctg
gctaactttgcccagctgccccactcacccaagctgtcctggctgcggcgccacttgctg
gtggtggtggggactgtgttgatctccactgaggcctttggggagggctcccaggcctcc
cgtgactacctctctctgctgctgcacctggcctcggacctcaacgaccagcggcagggg
ccgggtgaccgcggggtgcgggcggccgcctgcgagagtctgagggagctggagtgctgc
taccccggcctgttctcccggcggttggactcgctgcgctccatgcagcagcaggagctc
acgcctgtccaccagggctatacgctgctatacagcctggccctgcgcaatgccgtgctg
ctgctggcccgccggggcgaggggactctcagtgaattgctggctggcaacgaggggctg
gcttgggaggcggtggggaatgccggggcagtgtctccagcctccattgaccgcctgctg
ctgctgcccaccccggccgagaccaaggagctgaagtcggtgctgtcccagctgctggat
gactcctatctgctgaccccacctgcccagggccagcttctgtggcatctggcccaggtg
ttgtgcgtgatccgcacccagtcacctgccatcttcaaggcgcagctggtgcggttgttt
ggcacagcccacgtggcactgctgcacgccagcctgcagctcaaagggcttttcaccgat
agcctcttcacagccgaggacgaggccttcctcctgcgccgcctggtgggcatggcccag
catccctcactgccctcgcccctcaaactcttctaccttgactgcctgctgcacttcccc
gagaaccgcccgctgggctcgggctctgaagaggggctgcccgtcctgctcacaccccgc
ctggcctcctgcctcttcccctcactcttcaacgacccgggcaccatgctggcacgcctc
aacctgctgagtctggtgtgcctggaaaaccagggccccgaggctgagcggggtgttggg
tatatctttgagcatgtcctggcactggcagacaccgtggcaggcaaaggtggatgtgaa
gccactgggctcttcttccgagccgcctacctctttgcccgctactttggctcaaggcca
cagcttatggcagagctgacgggcaccctggtggggctgtatcgccagcgctgctccctg
gcccccaacctcataaacctgctcaatgagacccaggcagtgctggatgacccagcctgg
cccgcatccttgagcaaggccctgcaggagctgactgtgggcatgccgctgctgccaccc
tgggagcaggagctgggctggcacctcaagctgttggcccgggtggcaaaggagagtggg
gtcccgcagggcagcacacttgggttcctgcagcgcctggtgcggctggcaggtgctgga
cagctgggagattggcacattggccaggctttgctgagcgtctgccgcaacctgctgcag
caccagcctccacctgccatggggtgccagctggctgagctgctccaagacgtctcactg
agctacccagatgtggatgtgcaggatcgggctcgcttctactacacactcctgtcgtgc
ctgtccggggacaagctgggggcagtgctggcacctggggggcgcctcaaagcccggact
ctctcctcctccatcatggcagatagcgagaacttcgctgccgcgctaaccgtgcaccca
gctccgcaacccctgcttcagctgcagcgcgaggccccagccaagcccaccctggtacca
gtgccagccttccagccgtgccctgctgatgctcaggaggtgaaggactgctgccgacag
ctcctggagctgcattctccagcccggctcagcctgacataccggctgctccacacaggg
tcctcacctgagcgactcttctgcctcctgctgcgcttcgagcgctctgacaacttctat
gagccagtgcctgacgtgtgcgtgccctgcctctctaccacccgcccatcacccgtcctc
acacttcacctgcagccccgctgcccctaccccaccgagctggcagtgagcgccttgtac
accacgcaaaccggcctcacctattgcagccagctagaaccactgcaggtggcctttccg
gacatcttcctgcctctggcactgcctgtgaattgggactgtgagagccggcgccacctc
tttgacaccctctggtcctccctgtgcccagatgggtcaggtgactgcgctgagagcctc
ttttgctggcccaccacccaacagcccctgggtgtcctggtgcaggctcactttgccagc
tacgtagtggcagaggagccgggcacctacaagattgccattgccctgccaccccactac
catgtgctgctgcaggcacaggggatccagggggcagcacgtgtcaccattcgcactgac
aactggaaggtgctcccccacctgagtgcctatctgcggaaggttgtggagtga
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