Trachemys scripta elegans (red-eared slider): 117884051
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Entry
117884051 CDS
T07347
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117884051 (RBFOX1)
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117884051 (RBFOX1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
117884051
NCBI-ProteinID:
XP_034640005
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All DBs
Position
10:complement(27048371..28571149)
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AA seq
441 aa
AA seq
DB search
MEIAQKPHASGAFSFHERSLLSDTKAECSSCVETEDRKISRQQMSCEREQLRGNQEATAP
PDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHTEQSA
ADTNAQTVSGTATQTDDAAQTDGQQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMF
GQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT
NKKTVNPYTNGWKLNPVVGAVYSPEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFP
YPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQEPVYGNKLPQGGYAAY
RYAQPATATAAAYSDSYGRVYAADPYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVG
LVLSSLQASIYRGGYSRFAPY
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgcacagaagccccatgcaagtggtgccttcagttttcatgagcgaagcctt
ctttctgatactaaagcagagtgcagttcctgtgtagaaacagaagacagaaaaatttca
agacaacagatgagttgtgaaagagaacaactaaggggtaatcaggaagctacagcacct
cctgacacaatggcgcagccttatgcctcagctcagttcgctccacctcagaatgggatc
ccggcagaatatacagccccacacccccatccagctccagactacacaggccagaccaca
gttccagagcacacgttaaacatgtaccctcctgctcagacacacactgaacagagtgca
gctgacacaaatgcacaaactgtctccggcacagccacacagacagatgatgcagcacag
actgacggccagcaacagacacaatcctctgaaaacacagaaaacaaatcacagccgaaa
cggctgcatgtctcaaatatacccttcagatttcgagatccagatctcagacaaatgttt
gggcaatttggtaaaatcttagatgttgaaattatttttaatgagcgaggctcaaaggga
tttggtttcgtaactttcgaaaatagtgctgatgcggacagggcgagggagaaattacac
ggcaccgtggtagagggccgtaaaatcgaggtaaataacgcgacagcacgtgtaatgaca
aataaaaagacagtcaacccttatacgaatggctggaaattaaatccagttgtcggtgca
gtttatagtccagaattctatgcaggcagggtgctgctgtgccaggcaaaccaggaggga
tctcccgtgtacagtgcccccagttcactagtatacacatccacaatgccaggcttccct
taccctgctgcaactgcagctgctgcttacagaggtgcacatctaagaggtcgaggtcgc
acagtgtacaacacgtttcgtgcagcagccccccctcctccaattccagcctatggcgga
gtagtgtatcaagagcctgtgtatggcaataagttaccacagggtggttatgctgcctac
cggtatgcccagcctgccactgccactgcagctgcctacagtgacagttacggacgagtt
tatgctgcagacccctaccaccacacacttgctccagcagccacctacggcgttggtgcc
gtgaatgcttttgcacccttgactgatgccaagactaggagccatgctgatgatgtcggt
ctcgttctttcttcattacaggctagtatataccgagggggatacagccgttttgctcca
tactaa
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