Trachemys scripta elegans (red-eared slider): 117886573
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Entry
117886573 CDS
T07347
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04217
Necroptosis
tst04622
RIG-I-like receptor signaling pathway
tst04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117886573 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117886573 (CYLD)
04625 C-type lectin receptor signaling pathway
117886573 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117886573 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117886573 (CYLD)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117886573 (CYLD)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C67
117886573 (CYLD)
Ubiquitin system [BR:
tst04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117886573 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
117886573
NCBI-ProteinID:
XP_034644402
LinkDB
All DBs
Position
13:28959659..29001933
Genome browser
AA seq
949 aa
AA seq
DB search
MNSGLWSQEKASWEERVFYLLLQECSVLDKQNQKLLKVPKGSLSQFIQDRSSVGHGRNIP
SKGKKMQICLKVLEQPHPVLFVDEKDVTEINEKLAELLLAITNCEERYSLFKSKSRLSKG
LHIDVGSPVRVQLRSGDDKFPGVVRFRGPLLQDRLLSGIFFGVELLEEGRGQGFTDGQYQ
GKQFFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDTMQVELPPLEINSRVSLKIGE
GIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHINDV
IPETQDRRVPKLTFASRGGGDKSLFNHSKQKITGSTSEPGNRNRSEFFYTLNGSSIDSQP
QTKSKNTWYIDEVAEDSAKSLADSSSGFGHSSPPLQPPPTNCLSNENRFHSLPFSLTKTS
NTNGTIGHSPLSLSVQSVIGDLNTAATQECPSIVMPVNNWHGLEAGSLAEVKENPPFYGV
IRWIGQPPGVNEVLAGLELEDECASCTDGTFKGTRYFTCAPKKALFVKLKSCRPDSRFAS
LQPVPNQIERCNSLAFGGYLSEVVEENTPPKTEKEGLETMIGKKKGIQGHYNSCYLDSTL
FCLFSFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIFGYVCATKIMKLRKILE
KVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNEKVGV
PTIQQLLEWSFINSSLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLEDTPRQ
CRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPVSLPKDLPDW
DWRHGCIPCQKMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIPQVT
PCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaggcttatggagtcaagaaaaagccagttgggaagagcgtgtcttttatttg
cttctccaggaatgcagtgttttagacaaacaaaatcaaaagcttttgaaagtacccaag
ggtagcctaagccagtttattcaagatcgttcttctgtgggacacggcagaaatatccct
tctaaaggcaagaaaatgcagatttgtttaaaggttctggaacagccgcatccagtcctg
tttgtggatgagaaagatgttacagaaataaatgagaaactagctgagttgcttttggct
attaccaactgtgaggaaagatacagcctgtttaaaagcaaaagccgattaagtaaaggc
ctgcacatagatgttggctcacctgtgagagtacagctgaggtcgggagatgacaaattt
cctggagttgttcgcttccggggacccttgttacaagacagattattatcagggatattt
tttggagtagaactactggaagaaggtcgtggccaaggctttactgatggacagtaccaa
ggaaaacagtttttcagatgtgatgaggattgtggagtttttgttgccttggacaaacta
gagttggtggaggatgatgacaatgaactggagagtgattatgcagctccagttgacacg
atgcaggtagaacttccgcctttggagatcaactccagggtttctctgaagataggagaa
ggtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaaagtttagga
tacgttgttggagtggacatggataatcctattgggaactgggatggaagatacaatgga
atacaactctgcagttttgcaagtgtagaaagtacacttctcttgcatatcaatgatgtt
atcccagagacacaggacaggagagttcccaaacttacctttgcctcaagaggtggtggt
gacaaaagcttattcaatcatagtaagcaaaagatcacaggatctacctccgagcctgga
aatagaaacagatctgaatttttttatacattaaatggctcttcaattgattctcaacca
caaactaaatcaaaaaacacatggtatattgatgaagttgctgaagactctgcaaaatca
cttgccgactcatcttctggattcggtcattcttcaccaccactacagccgcctccaaca
aactgtttatctaacgaaaatagatttcactctctaccttttagcctgacaaaaacgtcg
aatactaatggtactattggacatagtcccctctctctgtctgttcaatcagttattggg
gatttgaacactgctgccactcaggaatgtccatcaatagtaatgcctgtcaataactgg
catggtcttgaagcaggttcactggctgaagttaaagagaatcctcctttctatggtgta
atccgctggattggtcagccaccaggcgtaaatgaagtattggctggattggaactggaa
gatgaatgcgcaagctgtacagatggaacatttaaaggaactagatacttcacctgtgcc
ccaaaaaaggctctcttcgttaaactcaagagctgcaggccagattctaggtttgcatca
ctgcagcctgttcccaaccagattgaacgctgcaactctctagcctttggaggatactta
agtgaagtggtagaagaaaacactcctccaaaaacagaaaaagaaggtttagaaaccatg
attggaaagaagaaaggtatccagggtcactacaattcctgttacttagactccacctta
ttctgcctgttttcttttagctctgttttggacactgttttacttagacctaaagaaaag
aatgatgtagaatattatagtgaaactcaagagctgctaaggacagagattgtaaaccct
ctgcggattttcggatatgtgtgcgccacgaaaataatgaaattgaggaaaatacttgaa
aaagttgaagctgcatcaggattcacttctgaggaaaaagatccagaagaattcttgaat
attttatttcatcatattttaagagtagagccactgttaaaaataagatcagcaggtcaa
aaggtacaagactgttacttctaccaaatttttatggagaaaaatgagaaagttggagtc
ccgacaattcagcagttactggaatggtcttttatcaatagcagcctgaagtttgcagag
gcaccctcatgtctgattattcagatgcctcgatttggaaaagacttcaaaatgttcaac
aaaatatttccatctctggaattaaatataacagacttacttgaagacactcctaggcag
tgccgcatatgtggaggacttgcaatgtatgaatgcagagaatgttatgaagatactgac
atttctgctggaaaaatcaagcagttttgtaaaacctgcaacacacaagttcacctacat
cccaagagacagagtcataaattcaatccagtgtcacttcctaaagatctaccagattgg
gactggagacatggatgtatcccttgccagaagatggagttatttgctgttctctgcata
gaaacaagccattatgtagcttttgttaaatatgggaaggatgactccgcctggctcttc
tttgacagcatggcagatcgggatggaggccagaatggctttaacattccacaagttaca
ccatgccctgaagttggagagtacctaaaaatgtctctagaagaactacattcactggac
tccagaaaaattcaaggatgtgcacgaagactactttgtgatgcttacatgtgcatgtat
cagagcccaaccatgagcttgtacaaatga
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integrated database retrieval system
