Trachemys scripta elegans (red-eared slider): 117887824
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Entry
117887824 CDS
T07347
Symbol
BPTF
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF isoform X1
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117887824 (BPTF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117887824 (BPTF)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
117887824 (BPTF)
NuRF complex (fruit fly)
117887824 (BPTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
Bromodomain
DDT
WSD
PHD_5
WHIM1
Motif
Other DBs
NCBI-GeneID:
117887824
NCBI-ProteinID:
XP_034646456
LinkDB
All DBs
Position
14:complement(27135983..27230831)
Genome browser
AA seq
3249 aa
AA seq
DB search
MRGRRGRPPKQQQPAAATAQASSPAPPAPPGPIGGLRSRQRGSSRGRWAASAQVEAVGPR
PRGAGAAQASSSSTASPRGGSKRKGGSGGSSTPGGGGSSSRGRGRAGAGAAGGGGAGGSG
SSQGRAASSRRSISKVVYDDHESEEEEESVVSEEEEEGDPEDNQDSEEQEEEEIMEEDDD
DDDSDYPEEMEDEDDASYCTESSFRSHSTYSSTPGRRRQRVHRPRSPILEEKDIPLLEFP
KSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHIVL
LKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQEAE
DYPYGPVESKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSA
VYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRNRRKY
WFLNRRLIIEEDSDNEKDKKLWYYSTKVQLAQLIECLDKDYWEADLCKTLEEMCQEIHRH
MDITEDLTNKARGNNKSFLAAANDEILDAIRIKKGEIVEDKSQAAEETDKDKNDVENNDQ
TDTEKGKEEPADQLQEKNEETPPEQDSENGKIEEPTDVGDKSNSVASSTDGSTTNPSAGE
TSSSEGKNAMGCQSETFDSNNVAEKKVASELPQDLSEETGQMTPSISPSASAAPLQSVEN
SNSSELNSMQNDSIKTSDDADNAEGGSQTSEEIGEKSNGERSESPCTGKGASGSTRMLTR
LRNPDSKLSQMKSQQVAAAAHEANKLFKEGREVLVVNSQGEISRLNTKKEIVMKGNISNY
FKLGQEGKYRVYHNQYATNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSK
VLTISTLRLTIIQLESNIPASFLHPNWASHRSNWIKAVQMCSKPREFALALAILECAIKP
VVMLPIWRESLGHTRLHRMTAIEREEKEKVKKKERKQEEEETMQQATWVKYTFPIKHQVW
KQKGEEYRVTGYGGWSWISKTHVHRFVPKLPGNTNVNYRKVLPTKNDGTTENECELDKRK
SPAKVKIETDSSKERKKDSHDPQEKDQKEIEISETLERVQVKEENKMSEEKVEIDMNSEN
LDHAKAEVEREVDCENRAIKEEPMEIDDVKIESPTKNEDIHSKADLINVSEGFHLRTCYK
RKVKTSKLDGLLERRVKQFTLEEKQRLERMKLEASSKPVGSRSVSPQKNIDEPQTTKAKE
GSQIHMSPQDRTHISGKIQTEDSVQDCLPTSSTPCTKTCEPDQPSLPSIDRLTKREGRVL
DDASEIQNSVQNITKEGDSEPITTDNSPGQEVLKKRESENPLMDDLKQTHTEDISKSGTL
NHEKSSEQKIFNTTMSQSECENPLQPVVTESSCETDVQPIAEKATSEEKPEKQVCDPENN
CMLKSHSEPVSPQENEGKDMAQKNTDIKTENKILFDQKQSLKNELTLEKTPESQTPEHMG
GVNVSGDLLNSKVTEANGEKQDEEQKMEASTINKCLDQLNLKSITDKKNNKHGEIETKVE
REKSVAFQINGKDIKVLSNEECLMKDTCDTKAGSDIEPKVNNISKSIPEHEIKPLTIKES
SVKPFMNGDITMEDTDLKNNLDTKSCLQSSAEIGGESGEYPLLPDKMSKCVQNIGEKQHS
LERSSFVDSASTQAQLSCKENNVISEVESMETEAIEGKEVAPSPVTSCEESSLSSDFTDQ
NGLQMYNKVENINGENKTKNKTVITEVTTTTSTVSTESKTVFKVAELSAFKDDKQTMVSS
TENCAISTVTTTTTVTKLTAPAADSNVDVISVQEHSKTVITTTVTDSLTIPGGTLVTSMT
VSKEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARRGGI
REVPYFNYNAKPAMDIWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWACLRWDDMA
AKPPPGGGTTRTETSETEITTTEIIKRRDVGPYGIRSEYCIRKIICPIGVPEAPKETPTP
QRKGLRSSALRPKRPETPKQTGPVIIESWVAEEELELWEIRAFAERVEKEKAQAVEQQAK
VSEQKKAEEFKAQMEVQLKQQRLAAQQKRLEQQKQLPTTATTVTTASSTATTASTPQKVV
VGPLTGPVPTGTKVVLTTKVGSPATVTFQQNKNFHQTFATWVKQGQSSAATSTAATSATT
IASTGQTFQIAGTPVTMAGKVITKLPLPANSKIVAVNVPSTQGGVVQVQQKVLGIIPSTT
GANQQTFTSFQPRTATVTIRPNTTGTLGTTCTSQIMPGTPLRPGMTVIRTPLQPSTLGKA
IIRTPVVVQQGILPSSQTQQVVTQIIRGQPVSTAVSNASTTSSPGQKVATAPGTPPQNIQ
PQTTTPQPTRPQQGQVKLTMAQLTQLTQGQGGSQGLTVVIQGQGQTTGQLQLIPQGVTVI
PGPGQQLMQAAMPNGTIQRFLFTPLSSSAATASTTTTTVSTSTSATGEQKQASQTQTQPV
LPPIQPHPHSQLQAQPQVQTPSIQPQPPAQPQTTQPSLQPEDQTQPESQSPTSAQSPVRS
EAQTVVAQPTKTPVTVQSPPQTQVPGLSQIQIQNQPQTVIHPQAQSQVPALQQAQVQTTT
QQQIQIQPQASLQIQTQLQQQSQPQIQTSLQTLPAAQNLNQIAVQSPSRPPLQIQQPTTK
VITVPQLQQQVQVLSQLQSHVVAQIQAQQGGVPQQIKLQLPIQIQQASPVQAHQIQNVVT
VQAASVQEQLQRVQQLREQQQKKKQQQIEIKREHTLQASNQSDIIQKQVVMKHNAVIEHL
KQKKTLTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVEQKRSKQNATKL
SALLFKHKEQLKAEILKKRALLDKDLQIEVQEELKKDLTKIKKEKEKAQAAAAAAAAAAA
AAAATPPPPPPPPPPPPSPSQHATSVTSATTVPAPVSSQKRKREEEKDSSASKSKKKKMI
STTSKETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDC
KRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEADLIDEYVCPQCQS
TEDAMTVLSPLTDKDYEGLRRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATM
EERILKRYYKKVTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASRSH
NNKLQSTAS
NT seq
9750 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccggcgaggcaggccgcccaagcagcagcagcctgcggcggccaccgctcag
gcgagctccccggctccgcccgccccaccgggccccattggggggctgaggtcccggcag
cggggcagcagtcggggcaggtgggcggcctcggcccaggtggaggcggtggggcccagg
ccgaggggggccggggctgctcaggcctcttcctcctccaccgcctcccccagagggggc
agcaagaggaagggaggcagcggcggcagcagcacccctggcggtggaggcagcagcagt
aggggcaggggccgggctggggctggagcagcagggggaggaggcgcaggaggcagcggc
agcagccaaggcagggctgcctcgtccaggaggagcatcagcaaagtggtgtacgatgat
catgagagtgaagaggaggaggagagcgtggtgtccgaagaggaagaggagggggacccc
gaggataaccaggactccgaggagcaggaggaagaggagatcatggaggaagacgacgac
gacgacgactccgattaccccgaggagatggaggatgaagatgatgccagctattgcact
gagagcagcttcaggagccacagcacctacagcagcaccccaggtagaagaagacaaaga
gtgcatcgtccacgttctccaatattggaagaaaaagacataccactccttgagtttcct
aaatcctctgaggacttaatggtgcctaatgagcatataatgaatgttattgccatctat
gaggtactacggaactttggcactgttttacgcctgtctccttttcgttttgaggacttc
tgtgctgctctggtaagtcaagagcaatgcacacttatggcagagatgcatatagtgctt
ttaaaagcagttttacgagaagaagacacttcaaatactacctttggacctgctgacctc
aaagatagcgttaattccactttgtatttcatagatggaatgacgtggccagaggttctg
cgggtatattgtgagagtgacaaggaataccatcatgttcttccttatcaagaggcagag
gactatccttatggaccagtagagagtaaaatcaaagttctacagttcttagtagatcag
tttcttacaacaaacattgcacgtgaggagctaatgtctgaaggtgttatccagtatgat
gatcactgtagggtttgtcacaaactgggggatttgctttgctgtgaaacttgctcagct
gtgtaccatttagagtgtgtgaaaccacctcttgaagaggtaccggaggacgaatggcag
tgtgaggtctgtgtagcgcataaggtgcctggtgtaactgactgtgttgctgaaatccaa
aaaaataaaccatacattcgacatgaacccattggatacgacagaaacagacggaaatat
tggttcctgaacagaagacttattatagaggaagattcagacaatgagaaggataagaaa
ctctggtactatagcacaaaggtccagctggcacagttaattgaatgcctcgacaaagat
tactgggaagctgatctttgcaaaactcttgaagaaatgtgccaagaaattcatcggcat
atggatatcacggaagaccttactaacaaagcacggggcaacaacaaatctttccttgct
gcagcaaatgatgaaatattggacgctattagaataaaaaaaggagaaatagtggaggat
aaaagtcaagcagctgaggaaacagataaggacaaaaatgatgttgaaaataatgaccaa
acagatactgaaaaaggcaaggaagaacctgcagaccaactacaggaaaaaaatgaagaa
acaccacctgaacaagattcagaaaacggaaaaatagaagagccaacagacgttggggat
aaaagtaactctgtggcatcaagcacagacggcagcaccacaaatccttctgcaggagaa
actagttcctctgaagggaagaacgcaatggggtgtcagtcagaaacctttgatagcaac
aatgtggcagagaagaaggtggcatcagagctcccccaggatctctcagaagaaactggt
cagatgacccccagcatcagtcctagtgcatcagctgcacccctccagtctgtcgaaaac
agcaacagcagcgagctaaattctatgcagaatgactctattaagacatctgatgatgct
gacaatgcagaaggaggatcccagacctcagaagaaataggggagaaatccaacggtgaa
agaagtgaatctccatgcacagggaaaggcgcatcaggctcgacacgaatgcttacccga
ttacgaaatccagatagcaagctgagccagatgaaaagccagcaggttgctgcagcagca
catgaagcaaataaattatttaaagaaggcagagaggttctggtggttaactcccaaggg
gaaatctcccggttgaacaccaagaaagaaatcgtgatgaaaggaaacatcagtaattat
ttcaagttaggtcaagaggggaagtatcgtgtctatcacaaccagtatgccaccaactca
tttgcattgaacaaacaccagcacagagaagaccatgacaagagacggcaccttgcacat
aaattctgtctgactcctgctggagagttcaaatggaatgggtctgtacatgggtccaag
gttcttaccatatctactctgaggctaactatcattcagctagagagcaacatccctgca
tcattccttcaccccaactgggcctcccacaggtctaactggattaaggctgttcaaatg
tgtagcaaacctagagaatttgcactagctttggctatattggagtgtgcaattaaacca
gttgtcatgctgccaatttggcgggagtcgttggggcacactagattacacagaatgaca
gctattgaaagagaagaaaaggagaaggtgaaaaaaaaagagaggaaacaagaggaggaa
gaaacaatgcaacaggctacatgggtgaaatatacttttcctatcaaacatcaggtttgg
aaacaaaaaggagaggaatatagagtaacaggatatggtggttggagctggattagtaaa
acacatgttcataggtttgtgcctaaattacctggaaatactaatgtcaattacagaaaa
gtgctaccaacaaagaatgatggtaccactgaaaatgagtgtgaattggataaaagaaaa
agtccagcaaaagtaaaaatagagactgattcttctaaagaaagaaaaaaagattctcat
gatccacaagagaaggaccaaaaggaaatagaaatttctgaaaccttggagagagtccaa
gtaaaggaagaaaacaaaatgagtgaagaaaaggtggaaattgatatgaattctgaaaac
ttagatcatgcaaaagctgaagtggaaagagaagttgattgtgaaaatagagccatcaag
gaagaacccatggagatagatgatgtaaaaattgaatcccccacaaaaaatgaggatatt
cactctaaagcagatttaatcaatgtcagcgaggggtttcacttaaggacttgctacaaa
agaaaagtaaaaacatcaaaattagatggactacttgaaaggagagtaaaacagtttacg
ctggaagaaaaacagcgcctagaaaggatgaagctggaggctagttctaaacctgtaggc
agtagatctgtgagtccacagaaaaacatagatgagccacaaacaactaaagcaaaagaa
ggaagccagatacacatgtctccccaagacagaacccatatttcaggtaagatccaaact
gaagattcagtacaggactgcttgccaaccagcagtacaccttgtaccaaaacctgtgaa
ccagaccagccttctttgccttccatagacagactgacaaaaagagaaggccgagtactg
gatgatgcctctgaaattcaaaattcagttcagaacatcactaaagaaggtgattctgaa
ccaatcactactgataatagtccaggacaagaggttcttaaaaagagagagagtgagaat
cccctcatggatgacttaaaacaaacacacacagaagatataagcaagagtggcacctta
aaccatgaaaaatcttcagaacaaaaaatatttaataccacaatgtctcagagtgaatgt
gaaaacccattacagccagtggtaactgaaagcagctgtgaaacagatgttcagcccatt
gctgaaaaagcaacctcagaagaaaaacctgaaaaacaggtctgtgacccagaaaataat
tgcatgctgaaaagccattctgaaccagtgtccccacaagaaaatgagggaaaagatatg
gctcagaaaaacacagatattaaaacagaaaacaagattttatttgatcagaaacaatcg
ttaaaaaacgagctaactttagaaaaaacacctgaaagccaaactcctgaacacatgggt
ggagtaaatgttagtggtgatttattgaattctaaagtcactgaagccaatggtgaaaag
caagatgaggaacagaaaatggaagcaagtaccataaacaaatgtcttgatcagctgaat
ctaaaaagtatcactgacaaaaagaacaataaacatggagaaatagagactaaagtggag
agagagaaatcggtggcatttcaaattaatggaaaagacattaaggtattgtcaaatgaa
gaatgcttaatgaaagatacctgtgatactaaggcagggagtgatattgaacctaaagtc
aataatattagtaaatccattcctgaacatgaaataaaaccattgactattaaagaatcc
tctgtaaaaccattcatgaatggtgatatcactatggaggatacagatttaaaaaataac
ttggatactaaatcatgtttacaaagttctgcagagattggtggtgagtctggagagtat
cctctgcttccagataaaatgtccaagtgtgtgcaaaacattggagaaaagcagcattct
cttgaaagatccagctttgttgatagtgcttctacgcaagcacagctttcctgtaaagaa
aataatgtgattagtgaagtagaatccatggaaacagaagccattgagggtaaggaagtt
gcaccctcaccagtaacttcttgtgaggaatctagcttgagtagtgactttactgatcag
aatggcctgcagatgtataataaagtcgaaaatatcaatggagaaaataaaacaaaaaat
aaaactgttattacagaagtgaccaccacaacatcaactgtttccacagaatccaaaaca
gtgtttaaagtagcagagttgtcagccttcaaggatgataaacaaaccatggtgtcatct
acagaaaattgtgccatttccactgtaactaccaccaccactgtaactaagcttaccgca
cctgctgcagacagcaatgttgatgtcatctctgtacaggagcacagtaaaactgtgatt
actacaacagtaactgattcattaactattccaggaggcacattggtgacttccatgact
gtgagcaaagaatattccacaagggacaaagtgaagttaatgaaattttcgagacccaaa
aagactcgttctggaacagccctgccatcttacagaaaatttgttaccaaaagcagtaaa
aagagtatatttgttttacccaatgatgatttaaaaaagttggccagaagaggagggatc
agagaggttccctatttcaactacaatgcaaaacctgccatggatatttggccgtatcca
tccccaagaccaacttttggtatcacttggagatatcgacttcaaaccgtgaaatcattg
gctggggtgagccttatgttgcggttactctgggcatgtttaaggtgggatgatatggct
gcaaaacccccacctgggggaggaactacacgcacagaaacatctgaaactgaaattaca
acaactgaaataatcaaacggagagatgttggtccttatggaattcgttcagagtactgt
ataagaaaaatcatttgccctattggtgtaccagaggctccaaaagaaactcctacacct
cagaggaaaggccttcgatcaagtgcattgaggccaaagaggccagaaacacccaagcag
acaggccctgttatcattgaaagttgggtagcagaggaggaattggaattatgggagatc
agggcatttgctgaaagggtggagaaagaaaaggcacaggcagttgagcagcaggctaag
gttagtgaacagaagaaggctgaggaattcaaggcccaaatggaggttcaactaaaacag
caacgattggctgcccagcagaagcgactggaacaacagaagcagttgcctacaacagcc
actacggtcactacagcaagcagtactgcaaccactgcctcaactccacagaaggttgtg
gtaggcccattaacaggcccagttcctactggaaccaaagtagtgcttactactaaagtg
ggctctccagctacggtaacattccagcagaacaagaacttccatcagactttcgctacc
tgggttaaacaaggccagtcctcggcagctaccagcacagctgctacatcagctacaacc
attgccagcacaggtcagacgttccagattgcaggcactccagtaactatggcaggcaaa
gtgataacaaagttgcctcttccagcaaacagcaagattgttgccgtcaatgtgccatca
acccaaggaggtgttgttcaagttcagcaaaaagtgttgggtatcattccatcaactaca
ggtgcaaatcaacaaacatttacttcattccagccaaggacagcgactgtaactattagg
ccaaataccacagggactctaggtacaacatgtacttcacaaataatgccaggaacaccg
ctccgcccaggtatgacagtaatacggacaccacttcagccatcaacattaggaaaggcc
attattcgaacacctgtagtggtgcagcaaggtattcttccatccagtcagactcaacag
gtggtgactcagataattagaggtcagcctgtctcaactgcagtttctaatgctagcaca
acttcaagtcctggacaaaaggtagcaacagctccaggaacaccaccacagaatatacaa
ccacaaaccacaacaccgcagcccactcgtccccagcaagggcaagtgaaacttactatg
gcccaactcacgcagctaactcaaggacagggtggcagtcaggggttgactgtggtaatt
cagggacagggtcaaactactgggcagttacagttgatacctcagggtgtgactgtaata
ccaggtccaggacaacagctaatgcaagcggctatgccgaatggtacaattcaaaggttc
cttttcactccattatcatcatctgctgctacagctagcacaactactacgacagtttcc
acttcgacatcagctacgggagaacagaaacaagcctcacaaacacagacacaaccagtg
ctgccaccaattcagccccaccctcacagtcaattgcaagctcagccacaggtgcagacc
ccgagtattcagcctcagcccccagcccagccacaaactactcagccctcacttcagcct
gaagatcagacacagccagaatctcagtctccaacgtcagctcagtctccagtcagatct
gaagcacaaactgtcgtggcacaaccaactaaaactccagttacagttcagtctccgcca
cagacccaggttccaggcctgtctcaaattcaaatccagaatcaaccacagactgtgatc
catccacaagctcagtcccaagtcccagctctgcagcaagctcaggtgcagaccacaacc
cagcaacagatacaaatacaaccccaagcttctctacaaatacaaactcaactgcagcag
cagtcgcaaccccagattcagacttcccttcagactcttccagctgctcaaaatttaaat
caaattgctgtacaatcgccatctcgccctccactgcagatccagcagcctacaacaaaa
gttattaccgtacctcagcttcagcagcaagtccaagttctctcccaacttcagtctcac
gttgtagctcagatacaggcccagcagggtggtgtgccccagcagattaagcttcagtta
cctattcagattcaacaagccagcccggtgcaggctcaccagattcagaatgtggtaaca
gttcaagcagctagtgttcaagagcagctgcaaagggttcagcagctcagggagcaacag
caaaagaaaaagcagcaacagatagaaattaaacgtgaacacactcttcaggcttctaat
caaagtgacattatccaaaaacaggtggtgatgaaacacaatgctgtaatagaacacttg
aaacagaaaaagacactgaccccggctgaacgagaagaaaatcagagaatgatagtgtgt
aatcaggtgatgaagtatattttggataagatagataaagaagaaaaacaggcagctaag
aaacggaagcgagaagagagtgtggaacagaagcgtagtaaacagaatgctaccaagctc
tcagctctgcttttcaaacataaagaacagcttaaagcggaaatactgaaaaaaagagca
cttctggacaaagatctacaaatcgaagttcaggaagagctaaagaaagacttgactaaa
attaagaaagaaaaagaaaaagcacaggcagcggccgctgccgctgccgcagctgctgct
gcggcagcagcaacaccacctccacctccacctcctcctccaccaccaccatcaccatca
cagcatgccaccagcgtcacatctgccaccacagtcccagcgccagtatcttcccagaag
agaaaacgagaggaggagaaagattcttcagcttccaagtccaagaaaaagaaaatgatt
tctactacctcaaaggaaaccaagaaggacacaaagctttattgcatctgtaaaacacct
tatgatgaatcaaagttctatattggctgtgatctttgtactaactggtatcatggagaa
tgtgttggcatcacagaaaaggaggctaagaaaatggatgtgtacatctgtaatgattgt
aaacgggcacaagagggcagcagtgaggaattgtactgtatctgcagaacaccttatgat
gagtcacaattttacattggctgtgaccgatgtcagaactggtatcacgggcgctgtgtt
ggtattttgcaaagtgaggcagatctcattgatgagtatgtctgtccacagtgtcagtcg
acagaagatgccatgacagtgctcagtccactgactgataaagattatgagggattacga
agagtactacgttccttacaggctcacaagatggcatggcccttcctagaaccagtagat
cccaatgatgcaccagattattatggtgttatcaaagagcctatggaccttgctaccatg
gaagaaagaatcctgaaacgttactacaaaaaggtgacagagtttgtggcagatatgacc
aaaatttttgataactgtcgttactacaatccaagtgactcccctttttaccaatgtgca
gaggttcttgaatcattctttgtacagaagctaaaaggattcaaggcaagcaggtctcat
aacaacaaactgcagtctacagcttcttag
DBGET
integrated database retrieval system
