Trachemys scripta elegans (red-eared slider): 117888655
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Entry
117888655 CDS
T07347
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117888655 (CACNA1A)
04020 Calcium signaling pathway
117888655 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117888655 (CACNA1A)
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117888655 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
117888655
NCBI-ProteinID:
XP_034648137
LinkDB
All DBs
Position
16:16321917..16493974
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AA seq
2370 aa
AA seq
DB search
MILATIIANCIVLALEQHLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKG
SYLRNGWNVMDFVVVLTGILAKVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFDSVTGEIKVDVPCGTEEPARMCPNG
TECREYWEGPNYGITQFDNILFAVLTVFQCITMEGWTELLYYSNDASGNTWNWLYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVIL
AEDETEEEQRLPFDVGALRRATIKKSKTDLLNPEEADDQLADISSVGSPFARASIKSAKL
ENSTFFHKRERRMRFYIRRMVKTQAFYWTVLSLVALNTLCVAIVHYSQPDWLSDFLYYAE
FIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAVMKPGTSFGISVLR
ALRLLRIFKITKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFD
DGTPSTNFDTFPAAIMTVFQILTGEDWNMVMYDGIKSQGGVHQGMVYSVYFIVLTLFGNY
TLLNVFLAIAVDNLANAQELTKDEQEEEEVANQKLALQKAKEVAEVSPLSAASMSIAVKE
QQKNQKSSKSVWEQRTSEMRKHNLLASREALYNEMDPEDPWKVTYARAMRPDIKTHLDRP
LVVDPQENRNNNTNKTRPNEPSLEQRFSQQRAEDFLRKQARYHERSREFSSSRSYEQPDA
EGLEARRQRSGSKETSLNQDGTYREQGYESSREQGYRDSASERIQAVDPHRRHQHRQGGS
KESRSGSPRMAEGERDHRRQRAHRRMGEEGGGGRDEGSKVERRLRHREGSRPSRGDVEGE
QPDGERRRRHRHAAQSTYDTNSKRDDRERRHRRRKENQGPSPVPGPNLSTTRPIQQDMGR
HEPQVAEDIDNMKNNKLATTEPSTPHNASHLQSPAKVGHHANCTATRASHNLPGTLGQPP
PNSQNAANRQAPSNPPQPGLPKTPENSLIVTNPSTQNNPAKAAKKPEHTTVDIPATFTPP
INNIVVQVNKNANPDPLPKKEEEKKEEEDGEQEENGPKPMVPYSSMFILSTTNPFRRLCH
YIVNLRYFEMCILMVIAMSSIALAAEDPVQPNATRNNVLRYFDYVFTGVFTFEMVIKMVD
LGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTSSSRGSSKGKDINTIKSLRVLRVLRPL
KTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFE
KDCRGEYLVYEKDNEVKAQSREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDAT
YENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERA
CIDFAISAKPLTRHMPQNKQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFDKASTA
YEDVLKMFNHVFTSLFSLECLLKIMAFGVLNYFRDAWNIFDFVTVLGSITDILVTEFGNN
FINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQV
FGNIGIEDEEEDSAITEHNNFRTFFQALMLLFRSATGEAWHEIMLACLSGKPCDENSGIK
EHECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAE
YDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLM
ALIRTALDIKIAKGGADKQQMDAELRKEMMAIWPNLSHKNLDLLVTPHKSTDLTVGKIYA
AMMIMEYYRQSKAKKLQAMREEQNRTPLMFQRMEPPSPTQEGVPGQNALPSSQLDQGGGL
SAPEGGIKESQSWVTERAQAMFQKTGTWSPERGRPEDMPNSRPNSQSVEMREIGKDGYSD
SDHYLPMEGHGRAASMPRLPAENQRRKVRSRGNNLSTITDASPMKRSASMLGHSRAKGIR
LDDYSLERVVPEENQRHHQRRRERSHRASERSLSRYADVDTGLGTDLSMTTPSGDLPPKE
RDQERGRPKDRKHHHHHHHHRHHHPSSDKERYSQERHEHSRPRSRDRRWSRSPSEGHEHM
PHRQGSSSVSGSPVLSTSGTSTPRRGRRQLPQTPSTPRPHVSYSPVVRKVISTGPQQQPH
HPSRISTPAPRRYPSLPADPQAAERPGRSPAMERHTVPPRNDSPRAYRHASSRWSAPHVS
EPHPGPRRGGYYRSPDCTAPPTEDAFSYETTHISSSGRSPRTSRAGGGSSPSRPGRRLPN
GYYHSHGAAKPRSRQGLHEPSSETDEDDCC
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atgattttagctactatcatagcgaactgcattgttcttgctctggagcagcacctgcct
gatgaagacaagaccccgatgtcagaacgactggatgacacggaaccatatttcatcgga
atcttttgttttgaggctggaattaaaatcatcgccttagggtttgctttccacaaaggc
tcctacctgaggaatgggtggaatgtgatggacttcgtggtggttcttacaggcatcttg
gcgaaagtcggctccgacttcgacctgcgaacactgcgggcagttcgtgtgctccggccg
ctaaagctggtgtcggggatcccaagtttacaagttgttctgaagtccatcatgaaggct
atgatacctctgctacaaattggcctactcttgttttttgcaatccttatttttgcaatc
ataggattagaattttatatgggaaaatttcacaccacctgctttgactcggtgacaggc
gaaatcaaggtcgatgttccatgtgggacagaagaaccagcccgcatgtgccccaatggg
accgaatgccgtgagtactgggaaggcccgaattacgggatcacgcagttcgataacatc
ctgtttgctgtgctgactgtcttccagtgtatcaccatggaagggtggaccgaactcctt
tattatagcaacgatgcctcagggaacacttggaactggctgtacttcatccccctcatc
atcattggctccttttttatgctgaaccttgtgctgggggtgctgtctggggagtttgcc
aaggaaagagagcgggtggagaaccggcgggcgtttctcaagttgagacggcagcagcag
attgagagggagctcaacggctacatggagtggatctccaaagcggaagaagtgatccta
gcggaggatgagacggaggaagagcagaggctcccgtttgatgttggagctctgcggaga
gccaccatcaagaagagcaagacagacttgctgaacccggaggaagcagacgatcagctg
gccgacatctcctcagtgggttcaccctttgctcgagccagcatcaaaagtgccaagctg
gaaaactccaccttttttcacaaaagggagaggaggatgcgcttctatatccgccgaatg
gtcaaaactcaggccttttactggacagtcctcagtctggtagcactcaacacattgtgt
gttgctatagtacactacagccagccagattggctctccgacttcctctactatgcagaa
ttcattttcttaggactctttatgtccgaaatgtttataaaaatgtatgggctcggaacg
cggccttactttcattcctccttcaactgcttcgactgcgccgttatcatagggagcatc
tttgaggtgatctgggctgtcatgaagcctggaacatcctttggaatcagcgtgttacga
gctctcaggttattgcgtattttcaaaatcacaaagtactgggcttccctacggaacctg
gtggtgtctctcctgaactccatgaagtccatcattagcttgctgttccttctcttcctc
ttcatcgtcgtctttgcccttttggggatgcagctctttgggggccagttcaattttgac
gatgggaccccttccaccaacttcgacactttcccagcagcaataatgacagtttttcag
atcttgactggcgaagactggaacatggtaatgtacgatggtatcaaatctcagggcggc
gtccatcaggggatggtgtactcggtctatttcattgttctcaccttgtttggtaactat
accctgctgaacgtgtttttggctatcgccgtggataacctggctaacgcacaggagctc
accaaggatgaacaagaggaggaggaggtggccaaccaaaaacttgcactacagaaagcc
aaggaggtggcagaagtgagccccctgtctgcagccagcatgtctatagcggtgaaagag
cagcagaagaaccaaaaatcctccaagtccgtctgggagcagagaacgagtgagatgcgg
aagcacaatctgctggcgagccgggaagccctgtacaatgagatggaccccgaggacccg
tggaaggtgacctacgcccgggccatgcggcctgacatcaagacccacctggaccggccc
ctggtggttgaccctcaggagaaccgcaacaacaacaccaacaagacccggcccaacgag
ccctctctggagcagcgcttcagccagcagcgggctgaggatttcctgcgcaagcaggcc
cgctaccacgagcgctcgcgggaattcagcagctcccgcagctacgagcagcctgatgca
gaggggcttgaggcccgacggcagcgcagcgggagcaaggagaccagtctgaaccaggac
ggcacctaccgggagcagggctacgagagcagccgggagcagggctaccgcgacagcgcc
tcggagcggatccaagctgtcgacccccaccgcaggcaccagcaccggcaagggggcagc
aaagagagccgcagcgggtcgccccggatggccgagggcgagcgggatcatcggcggcag
cgggcccaccgccggatgggagaggagggcggcgggggccgggacgagggcagcaaggtg
gagcggcgactgcggcaccgggaagggagccggccctcccgcggggacgtggagggtgag
cagcccgacggggagagacgccggcgccaccggcacgccgcgcagtccacctatgacacg
aacagcaagagggatgacagggagaggcggcaccggcgcaggaaagagaaccaaggcccc
agcccagtgcccggcccgaacctctccaccacgcggccgatccagcaggacatggggcgc
cacgagccacaggtggcggaggacatagacaacatgaagaacaacaaactagccaccacg
gagccctcaaccccccacaatgccagccacctccagagcccagccaaggtgggccaccat
gctaactgcacggccacccgggcatcccacaaccttcctggcaccctgggccagccgccc
cccaactcccagaatgctgccaaccgccaggcacccagcaacccaccccagcccgggctc
ccgaaaacccccgagaacagccttattgtcaccaaccccagcacccagaacaacccagct
aaggctgccaagaagccggagcacaccacagtggatatcccagccaccttcacaccaccc
atcaacaacatcgtcgtgcaagtgaataaaaacgccaatccagacccactgccaaagaag
gaggaagagaagaaagaggaggaggatggcgagcaggaggagaatgggcccaagcccatg
gttccctatagctccatgttcatcctctccaccaccaatccgttccgcaggctctgccat
tacatcgtgaacctgcggtactttgagatgtgcatcctgatggtgatcgccatgagcagc
atcgcgctggccgctgaggaccccgtgcagcccaatgctacccggaacaacgttctgcgc
tattttgactacgtcttcacgggtgtcttcacttttgagatggtcattaagatggtcgac
ctggggctggttcttcaccaaggcgcctatttccgggacctgtggaacatcctggatttc
atcgtggtcagcggagctctggtggcctttgccttcacgagcagctcacgaggcagcagc
aaagggaaggacattaacaccatcaaatcattgcgtgtcctccgcgtcctcaggcccctg
aaaaccatcaagcgattgccaaagctcaaggctgtctttgactgcgtggtgaactctctc
aaaaacgtcctcaacatcctcatcgtctacatgctcttcatgttcatcttcgccgtggtg
gccgtccagctcttcaagggcaagttcttctactgcacggatgagtccaaggagtttgag
aaggactgtaggggcgagtacctggtctatgagaaggacaacgaagtgaaagcccagagc
cgggagtggaagaaatacgagttccactacgacaacgtgctgtgggccctcctgactctc
ttcactgtgtccacgggggaaggctggccgcaagtcctcaaacactcggtggacgccacg
tatgagaaccagggccccagccccggctatcgtatggagatgtccatcttctacgtcgtc
tacttcgtggtcttcccgtttttctttgtgaacattttcgtggccttgatcatcatcacg
tttcaggagcagggggataagatgatggaggaatacagcctggagaagaacgagagagcc
tgcatcgactttgccatcagtgccaagcccctgacccggcacatgcctcagaacaagcag
agctttcagtaccgcatgtggcagttcgtggtgtcgccacccttcgagtacaccatcatg
gccatgatcgccctcaacaccattgtcttaatgatgaagttcgacaaggcctcaactgct
tatgaggacgtgctaaagatgttcaaccacgtcttcacttcgttattttccctggagtgt
ctgctgaagatcatggcctttggggtgctgaattatttccgtgatgcctggaatatcttt
gattttgtcacagttctgggtagcatcacagacatcttagtgacagagtttgggaacaac
ttcatcaacctgagcttcctgcggctcttccgtgctgcccgcctcatcaaactcctgcgt
cagggctacaccatccgcatcctgctgtggaccttcgtccagtccttcaaggcccttccc
tatgtctgtctgctgattgccatgctcttcttcatctacgccatcatcggcatgcaggtc
ttcggtaacattggcatcgaagacgaagaggaggactcggctatcacagaacacaacaac
ttccgcaccttcttccaggccctcatgcttctgtttaggagcgccactggtgaggcctgg
cacgagatcatgctggcctgtctgagcgggaaaccctgcgacgagaactcgggcatcaag
gagcacgagtgtggcaacgagttcgcctatttttattttgtctccttcattttcctctgc
tccttcctgatgctgaacctctttgtggccgttatcatggacaactttgagtacctgacc
cgagactcctccatcctggggccccaccacctggacgagtacgtgcgtgtgtgggcagag
tacgaccccgccgcttgtggccgaattcattataaggatatgtacagtttattacgtgtt
atatctcccccactgggcttaggcaagaaatgccctcatagggttgcttgcaagagactg
ctccgcatggacctgcctgtggctgacgacaacaccgtccacttcaactcaaccctcatg
gctctgatcaggaccgcgctggacatcaagatcgccaaaggaggagccgacaagcagcag
atggacgccgagctgcggaaggagatgatggccatctggcccaacctctcccacaagaac
ctggatctccttgtcacccctcacaaatccacggacctgacagtcgggaagatctacgcc
gctatgatgatcatggagtactaccggcaaagcaaggccaaaaagctccaggccatgagg
gaggagcagaatcgaacgccgctcatgttccagcgtatggagccgccgtcccccacccag
gagggggtcccggggcagaacgctctcccgtcctcccagctggaccaagggggtggcctg
agtgcgcctgaagggggcatcaaggagagccagtcctgggttaccgagagagcacaagcg
atgttccagaagacaggcacctggagtccagagcgaggtcgccccgaagacatgcccaac
agccgtcccaattcccagtctgtggagatgagagagattgggaaggacggctactcagac
agcgaccactacctccccatggaagggcatggccgggcggcctccatgccgcgactcccc
gctgaaaaccagaggaggaaggtgcgatcccgaggaaataatctcagtacgatcacggac
gccagccccatgaagcgctctgcctccatgctgggccactcgcgtgccaaaggcatccgg
ctggacgactactccttggagagggtcgtccccgaggagaaccagcggcaccaccagcgg
cggagggagcggagccaccgggcctcggagcgctcgctcagccgctacgcggacgtggac
acagggctgggcacggacctgagcatgaccacgccatcgggcgacctacctcccaaagaa
agagaccaggagcgaggacgacccaaggaccggaagcatcaccaccatcaccaccatcac
cgccatcaccacccctcctccgacaaggagcgctactcgcaggagagacatgagcacagc
cggccccgctccagagacaggcgctggtccagatcccccagcgagggccatgagcacatg
ccccacaggcagggtagtagttccgtaagtggcagtccagtcctttcaacatccggcacc
agtaccccaaggcgaggacgccgccagctcccacagaccccttctacaccccggccacac
gtgtcctattcccctgtggtccgtaaggtcatcagtacaggcccccagcagcagccgcat
caccccagcaggatatccacccccgcgccgagacgatacccctcgctccccgccgatccc
caggcggcggagcggcccggcagatcgcccgccatggagagacacacggtcccgccgcgg
aacgattcgccccgagcctaccgccacgccagcagccggtggtcggcgccccacgtctcc
gagccgcatccgggaccccgtcgtggcggttattaccggagtccggactgcaccgcgccc
cccaccgaggacgccttctcctacgagaccacacacatcagcagctcagggcgttcgccc
aggacttcccgggcgggtggtggctcttcaccctccaggcctgggcggcgacttcctaac
ggatattaccactcccatggagcagccaagccacgctcgcgccaaggactgcatgaaccc
tctagcgaaactgacgaagatgactgctgctaa
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integrated database retrieval system
