Candidatus Thiodictyon syntrophicum: THSYN_14130
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Entry
THSYN_14130 CDS
T05211
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy01501
beta-Lactam resistance
tsy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
THSYN_14130
01503 Cationic antimicrobial peptide (CAMP) resistance
THSYN_14130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsy02000
]
THSYN_14130
01504 Antimicrobial resistance genes [BR:
tsy01504
]
THSYN_14130
Transporters [BR:
tsy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
THSYN_14130
Antimicrobial resistance genes [BR:
tsy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
THSYN_14130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AUB81970
UniProt:
A0A2K8U8R3
LinkDB
All DBs
Position
3376635..3379799
Genome browser
AA seq
1054 aa
AA seq
DB search
MISDVFIDRPRLSIVISVVILLAGIISIGAIPVAQLPDIVPPQVTVTGAYPGASAAVVES
TVAQPVESKVNGVDNMLYMGSTSGNDGSYSLNVTFALGTDPDLNTVNVQNRVNLALPQLP
EELKRTGLTVQKQSTAMLQVVSLYSPKGTYDSLFLSNYATINVVDTLARVPGVGRVNQFG
ALDYSMRIWLDSARLTALGITPTDVMAAIKSQNIQAAVGRIGAQPMSNDAQFQITLQTKG
RLSEVKEFESIVVRANPDGSTVRVKDLGRVELGSKQSDSTSRLDGAPCASVAIYLAPGAN
AVKVAQAIDKAMVRLAERFPDGLTYAVVYDTTEFVNASLEKVIHTLLEAFVLVIIVVFLF
LGSWRATLIPLVAVPVALVGTFAGLLAIGFSANTVSLLAVVLAIGIVVDDAIVVVENVER
IMEEDQLPPREAAKKAMGQITGPILAITLVLLSVFLPVAFIPGITGQLFQQFAAVVAFSM
LISAVNALTLSPALCAVLLKPGHQRRGLMGRMMNGIDAVRDGYAGIVTRLVRIAMLVVVL
IIGIGLATGWLFKTTPTGFLPVEDQGAFMAEIQLPQGASLNRTLEVVKQVETIIAADPAV
AHVLAIPGFSIMDGVVQSNSAFAIGRLKPFAERTTPDLTVDAAIARIRAQTNAIAAAMII
PFNLPPIIGLGTGSGFEYKLQDLQGRTPEELSAAMRALVLAANQDQRLQGVFSTWATNNP
QVFLDIDREKAQTLGVTISDLFTALQATLGGYYVNDFNKFGRIWQVNIQGDTSDRNRFDD
VYRIHVRNSQGDMVPIRALMTPKLILGPQLIQRYNNYRSVTIQGGPAPGRSTGEALAAMA
SLSATTLPSGFGYEWTGTAFQELEAGGKTTAVLGLAVLFAYLFLVGLYESWSMPAAVLLS
VIVGVLGAMIALRLTGLPNDLYAQVGLVVLIGLASKNAILIVEFAMEQRRHGKSILEAAT
TAARLRIRAVLMTSFAFILGLIPLVIADGAGQASQRAVGTAVFGGMLAASILGIFLIPML
YVVFQRLRELVHGQPAAAARSAGQPEGAGHPPGL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggacgtcttcatcgaccgcccgcgcctctcgatcgtcatctcggtcgtcatc
ctgctcgccggtatcatcagtatcggcgccatcccggtcgcccagctccccgacatagtc
ccgccccaggtgacggtgaccggcgcctacccgggggccagcgccgcggtggtggagtcc
accgtggcccagccggtggagtccaaggtcaacggcgtcgacaatatgctctatatgggc
tcgaccagcggcaatgacggcagctattcgctcaacgtcaccttcgccctgggcacggac
ccggatctgaataccgtcaacgtccagaatcgggtgaacctggccttgccccagctcccg
gaggagctcaagcgcaccgggctcacggtgcagaagcagtccaccgcgatgctccaggtg
gtctctctttactcccccaaggggacctatgacagcctctttctgagcaactacgccacc
atcaatgtggtcgacaccctggcccgggtgcccggggtgggccgggtcaaccagttcggt
gcgctcgattacagcatgcgcatctggctggactccgcgcgcctgaccgcgctcgggatc
acgccgacggacgtcatggcggcgatcaagagccagaacatccaggcggcggtcgggcgc
atcggcgcccagcccatgtccaacgacgcccagttccagatcacgctccagaccaagggg
cggctctcggaggtcaaggagttcgagtccatcgtggtgcgtgccaacccggacggttcc
accgtgcgggtgaaggatttgggccgggtcgagttgggttccaaacagtccgactccacc
agccgactggacggggcgccctgcgccagcgtggccatctatctcgcccccggggccaat
gccgtgaaggtggcgcaggcgatcgacaaagcgatggtgcgcctggcggagcggttcccg
gacggcctcacctatgcggtcgtctatgacaccaccgagttcgtcaatgcgagcctggag
aaggtgatccacaccctcctggaggccttcgtgctggtgatcatcgtggtctttctcttc
ctgggcagttggcgcgccaccctgattccgttggtcgcggtgccggtggccctggtgggc
accttcgccgggctgctcgccatcggcttttcggccaatacggtgtcactgctcgcggtg
gtgctcgccatcgggatcgtggtggacgacgccatcgtggtggtggagaacgtcgagcgc
atcatggaagaggaccaactgccgccgcgggaggcggccaagaaggcgatggggcagatc
accgggcccatcctcgccatcacgctggtgctgctctcggtctttctgccggtcgccttc
atccccggcatcaccgggcagctcttccagcagttcgccgcggtggttgccttctctatg
ctgatctcggcggtcaatgcgctcaccctgtcgccggccctgtgcgcggtgctgctcaaa
ccgggccaccagcggcgcggcctcatggggcggatgatgaacgggatcgacgcggtgcgc
gatggttatgccggcatcgttacgcgcctggtacgcattgcgatgctggtggtggtactg
atcatcgggatcggccttgcgaccggctggctgttcaagaccacgcccacgggttttctg
ccggtcgaggaccagggcgccttcatggccgagatccaactcccgcagggggcctcgctc
aaccggacgctcgaggtggtcaaacaggtcgagaccatcatcgcggccgaccccgcggtg
gcccatgtgctcgccatccccggcttcagcatcatggacggcgtggtgcagtccaacagc
gcctttgccatcgggcggctcaagccattcgccgagcgcaccacgccggacctgacggtg
gacgcggccatcgcgcgcattcgcgcccagaccaacgccatcgccgccgccatgatcatc
cccttcaacctcccgccgatcatcgggctcggcaccggcagcgggttcgagtacaagctc
caggacctgcagggccgcaccccggaggaactgtcggcggcgatgcgcgccctggtcctg
gccgccaatcaggaccagcgcctgcaaggcgtcttctcgacctgggcgaccaacaacccc
caggtcttcctcgacatcgaccgcgagaaggcgcagaccctaggcgttacgatcagcgac
ctcttcaccgccctgcaggccacgctcggcggctactatgtcaacgatttcaataaattc
ggacgcatctggcaggtcaatatccagggcgacacgagtgaccgcaaccgcttcgatgac
gtctatcgtatccatgtgcgcaacagccagggggatatggtcccgatccgcgccctgatg
acacccaaactgatcctgggaccccagttgatccagcgctacaacaactaccgcagtgtc
accattcagggcggaccggcccccgggcgctccaccggcgaggccctggcggcgatggcg
agcctctccgccaccaccctgccgagcggcttcggctatgagtggaccggcaccgccttc
caggagttggaggcggggggcaagaccactgccgtgctggggctcgcggtgcttttcgcc
tatctcttcctggtcgggctctatgagagttggtcgatgccggcggcggtgctgctctcg
gtcatcgtcggcgtgctgggcgccatgatcgccctgcgcctcaccggcctgcccaatgac
ctctatgcccaggtgggcctggtggtattgatcggactggcgagcaagaatgccattctc
atcgtcgaattcgccatggaacagcgccgccacggcaaatccatcctggaggccgccacc
accgccgcccgcctgcgtattcgcgccgtcctcatgaccagcttcgccttcatcctcggc
ctgatcccgctggtcattgccgatggtgccggtcaggccagccagcgggccgtgggtacc
gccgtgttcggcggcatgttggccgcgtccatcctcggcatcttcctcatccccatgctc
tatgtcgtcttccagcgcctgcgggaactggtccacggccagcccgccgcggctgcccgc
agtgccggtcaaccagagggcgccgggcacccgccgggcctttga
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