Tenacibaculum tangerinum: P8625_07370
Help
Entry
P8625_07370 CDS
T09624
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ttg
Tenacibaculum tangerinum
Pathway
ttg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8625_07370 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttg03021
]
P8625_07370 (rho)
03019 Messenger RNA biogenesis [BR:
ttg03019
]
P8625_07370 (rho)
Transcription machinery [BR:
ttg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P8625_07370 (rho)
Messenger RNA biogenesis [BR:
ttg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P8625_07370 (rho)
BRITE hierarchy
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
AAA_22
Presenilin
Motif
Other DBs
NCBI-ProteinID:
WGH76952
LinkDB
All DBs
Position
complement(1681553..1683199)
Genome browser
AA seq
548 aa
AA seq
DB search
MFDISELKTKKLADLQIIAKSIGLTKTSQLKKLDLVYKILDAQAEASANEAKPKPTTNTE
KPKRKRIVKAKAEPKAKPAPVKTEEKVVVKKEERKEAPEKKDAVSTPQKKQDDTRQKQSS
EDKKQQQPQQQKQQHNNKNQNQNQNRGNKHNNNNNNNKNQNNKHHKSGNKYRDPDFEFDG
IIESEGVLEMMPDGYGFLRSSDYNYLSSPDDIYVSQSQIKLFGLKTGDTVRGNVRPPKEG
EKYFPLIRVSKINGLNPNIVRDRVSFEHLTPLFADEKFNLAEKGSSLSTRIIDLFSPIGK
GQRGMIVAQPKTGKTVLLKDVAKAIAANHPEVYQIVLLIDERPEEVTDMQRSVRGEVVAS
TFDEPADKHVRVANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVAPASGKILSGGID
ANALHKPKRFFGAARNIENGGSLTIIATALTETGSKMDEVIFEEFKGTGNMELQLERNIA
NRRIYPAIDLIKSSTRRDDLLLDEKTVQRMWVLRKYLADMNPIEAMEFIQDRIKRSLNNE
EFLISMNG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatttcggaattaaaaacgaagaaattagctgatttacaaattattgccaaa
tcaataggattgactaaaacgagtcaattgaaaaaattagatttagtatacaaaatttta
gatgcacaggcagaagctagtgccaatgaagctaaacccaagcccacaactaatacagaa
aagcctaaacgaaagagaattgtaaaggctaaagcagaacctaaagctaaacctgcacct
gtaaagaccgaagaaaaggtagtggtaaagaaagaggagagaaaagaggctcctgaaaag
aaagatgctgtaagtacaccccaaaagaagcaagacgatactaggcaaaaacagtcttca
gaagataaaaagcagcaacaacctcaacaacagaaacaacaacataataacaagaaccag
aatcagaaccagaatagaggtaataagcataataacaataacaataataataagaaccaa
aataataaacatcataagagtggcaataaataccgtgatccagattttgagtttgatgga
attattgaaagtgaaggcgtcttagaaatgatgcctgatggttatggttttttacgttct
tctgattacaactacttatcatcaccagatgatatttatgtatcgcagtctcaaataaag
ttatttggcttaaaaacaggagatactgttcgtggtaatgtgcgtccgccaaaagaaggg
gagaagtattttccgttaattagagtttcaaaaattaatggattgaatccgaatatagtt
cgcgatcgtgtttctttcgagcacttaactccattatttgcagatgaaaaatttaatcta
gcagaaaaaggaagttctttgtctacaagaattatcgacctattttctccgataggaaaa
ggacagcgtggtatgattgtggcgcaaccaaaaacgggtaaaactgtgctattgaaagat
gtagcaaaagcaattgcggcgaatcatccagaagtatatcaaatcgttttactaattgat
gagcgtccggaagaagtaacagatatgcaacgtagtgttcgtggagaggtagtcgcatct
acttttgacgagccagcagacaagcatgtacgtgttgctaatatcgtgttagaaaaagca
aaacgtttggtagaatgtggtcatgacgttgtaattttattagattctattacacgtttg
gcaagagcttacaatacagtagcaccagcatcgggtaaaattttatcgggtggtatcgat
gcgaatgcattgcacaagccaaaacgtttctttggtgcggcacgtaatatagagaatgga
ggttctttaactattattgctacagcacttacagaaactggatcgaaaatggatgaggtt
atctttgaagagtttaaaggtacaggtaacatggagttacagttagagcggaatattgcc
aaccgtagaatttatcctgctatcgacttaattaagtcgagtacacgtcgcgatgattta
ttattagatgaaaagacggtacaacgtatgtgggtattgcgtaaatatttagcagatatg
aaccctattgaagcaatggagtttattcaagatagaataaaaaggtcgttaaacaacgaa
gaatttttaatttcgatgaatggataa
DBGET
integrated database retrieval system
