Thermoanaerobacterium thermosaccharolyticum M0795: Thethe_00683
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Entry
Thethe_00683 CDS
T02407
Name
(GenBank) ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
tto
Thermoanaerobacterium thermosaccharolyticum M0795
Pathway
tto03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Thethe_00683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tto03400
]
Thethe_00683
Enzymes [BR:
tto01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Thethe_00683
DNA repair and recombination proteins [BR:
tto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Thethe_00683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AGB18373
UniProt:
L0IHR9
LinkDB
All DBs
Position
complement(685410..686333)
Genome browser
AA seq
307 aa
AA seq
DB search
MSMMDEKIPPMLAVSGQVFDDPDWLYEIKWDGSRTLAFLSSTTRLQDRRLVDVSHQFPEL
MKLNKFIRANEAILDGELIVLKDNKPSYRSIMMRKHQQNKLKIDFMSKSYPAIFITWDIL
YVDGKELLNRPLIERKQMLNKFVNECSIMRISDFIFEHGKTLFEETDKKRLEGVMAKKAD
SKYYKGKRSSLWQKFKHYITLNAVIIGYRTDKTALVLGLYNEENKIVHIGNVESGISQKE
LTAFMKVAKDIKVKSNFYGIKESNVQWIMPVLVSKVKFMEWSENFKMRAPSFLEFVYDAR
PYECKFM
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgatggatgaaaaaattccacctatgctggcagtatcaggccaagtatttgat
gacccagattggctgtatgagataaaatgggatggttcaaggactctggcattcctttca
tctacaacgagactgcaggatagaagacttgtggatgtaagtcatcaatttccagaactc
atgaagctaaacaaatttatcagggctaatgaagcaatacttgatggtgaattaatagtc
ttaaaagacaataagccaagttatagaagcataatgatgcgcaaacaccagcaaaacaaa
ctaaaaatagattttatgagcaagtcttatcctgccatatttattacttgggatatactt
tatgttgatggaaaagagcttttgaatcggccgttaattgagcgaaagcaaatgttaaat
aaatttgtaaatgaatgcagcataatgcgaatatcagactttatatttgaacatggtaag
actttatttgaagaaactgataaaaaacgactggaaggtgttatggccaaaaaagcagac
tcaaaatactacaaagggaaaagaagcagtctatggcaaaaatttaaacattacattacg
ttaaatgctgtaattataggatacaggacagataaaacagctcttgtactgggactttat
aatgaagaaaataaaatagtccacattggaaatgtagaatctggcatttcgcagaaagaa
cttactgcatttatgaaggtagcaaaagatataaaagtcaaaagcaacttttacggtatt
aaagaaagcaatgttcaatggatcatgcctgttcttgtttctaaagtgaagtttatggag
tggtcagagaatttcaaaatgagagcaccgtcttttttagagtttgtttatgatgcaaga
ccttatgaatgcaaattcatgtaa
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