Thermochromatium tepidum: E6P07_01060
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Entry
E6P07_01060 CDS
T06573
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ttp
Thermochromatium tepidum
Pathway
ttp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E6P07_01060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttp03019
]
E6P07_01060
Enzymes [BR:
ttp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E6P07_01060
Messenger RNA biogenesis [BR:
ttp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E6P07_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGU31705
UniProt:
A0A6I6DY68
LinkDB
All DBs
Position
225198..227114
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AA seq
638 aa
AA seq
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MTNTHLTSTRFDSLALDPRILAGLAEAGFVYCTPIQAETLPLALEGQDIAGQAQTGTGKT
AAFLVALMQRLLCQPHETASEPVEMPETPVSPWTESPESADGSSVPAPCDPASRRRGPRA
LVLAPTRELAVQIHKDTLLLSKHTGLRSTVVFGGTGYQQQREALMRGVDILIGTPGRLID
YYRQHVFDLKGIEVVVLDEADRMFDLGFIKDIRYLFRQMPPVERRQGMLFSATLSYRVTE
LAYEHMNHPRLVKIEADQVTADRVRQVCYLTANDEKIPLLLGLIRGWTGGRIMVFVNTKR
EADRVWGYLQGNGIDSAVLSGDVPQSKRLKLLRDFTNGTLSVLVGTDVAARGLHIPNVTH
VVNYDLPEDPEDYVHRIGRTARAGAAGDAVSFVCETYAFCLLDIEQYIGAKIPVEPLDPS
LLVEVDPRSRLRPDRADREERRDGRGSNEGRGLSARPLARDRRSGYERSAPRPELSNHES
DVSALGAASNPGAQPSVSPEPVAHPPRDRSDTKPPVRFKTLDEGFFDQLVDEWSERTGPE
LEIPDMPIIRRIRRVRGQLEPAALTSPPAKARSTETPRPAGASLGPTGESPALKTDSESA
APRIGKRRRRRRKPAEDAGRLVQTDTETLADQAPERVE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacacacatctgacctcgacccgcttcgatagtctggcgctcgatccccggatc
ctggccggtcttgccgaggccggctttgtttattgcaccccaatccaggccgagaccctg
ccgctcgcccttgagggccaggacatcgccggccaggcccagactggcaccggcaagacc
gcggcctttctggtggcgctcatgcagcgtctgttgtgccagccacacgagaccgcgtct
gagccggtggagatgcctgagacgcccgtctcgccctggactgagtcgcccgaatcggcc
gacggatcctccgtgcctgcaccgtgcgaccccgccagccgtcgccgcggtccgcgggcc
ttggtgctggcgccgacacgtgagctggcggttcagatccacaaggataccctgctcctg
tccaagcacacggggctgcgctcgaccgtggtcttcggcggcaccggctatcaacagcag
cgcgaggccctgatgcgcggggtcgacatcctgatcggcacaccagggcgcctcatcgat
tactaccggcagcacgtcttcgatctgaagggcatcgaggtcgtggtgctcgatgaggcc
gatcgcatgttcgatctcggcttcatcaaggacatccgctatctgttccgccagatgccg
ccggtcgagcgccggcaggggatgctgttctcggccacactgtcctatcgggtcacggaa
ctggcctatgagcacatgaaccatccgcgtctggtcaagatcgaggccgaccaggtgacg
gccgaccgcgtgcggcaggtctgttacctgaccgccaacgacgagaagatcccactgctg
ctgggactgatccgcggctggacgggcggtcgcatcatggtcttcgtcaacaccaagcgc
gaggccgatcgtgtctggggctatctccagggcaatgggatcgacagcgccgtgctctcg
ggcgacgtgccccagtccaagcggttgaagctcctgcgcgacttcaccaatggcaccctc
tcggtgctggtcggtaccgacgtggccgcgcgcggtctgcatatcccaaatgtgacccat
gtggtcaactacgacctgcccgaggatcccgaggactatgtgcatcgcattggacgcacg
gcacgtgctggggcggcgggcgatgcggtcagctttgtctgcgagacctatgccttttgt
ctgctcgacatcgagcagtacatcggcgccaagatcccggtcgaaccgctcgatccgagc
ctgctggtcgaggtcgatccgcgcagtcgcctgcgtccggatcgcgccgatcgcgaggaa
cgccgcgatggacgcgggtccaatgaagggcgcggtctatccgcgcgcccattggcgcgc
gatcggcgttccggatacgagcgctcggcccctcgccccgagctttctaaccacgagtcc
gatgtgtccgcgctcggcgccgcctccaaccctggggcacagcccagcgtttcgcctgag
cctgtcgcgcatccgcctcgggaccgttcggacaccaagccgccggtccgattcaagacg
ctcgatgagggctttttcgaccagctcgtcgacgagtggtcggagcgcaccgggccggag
ctggagatcccagacatgccgatcatccgccgcatcaggcgtgtgcgcggtcagctcgaa
cctgcggccctgaccagcccgccggccaaggcccggtccaccgagacgccgcgtccggca
ggggcgagcctggggccgaccggcgagtcgcctgccctcaagactgactcggaatctgcc
gcgcccagaattggcaagcggcgtcggcgtcggcgcaaaccggcggaggatgcagggcgt
ttggtccagactgataccgagacgcttgcggatcaagcgcctgagcgcgtggaatga
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