Thermus thermophilus SG0.5JP17-16: Ththe16_1181
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Entry
Ththe16_1181 CDS
T01867
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tts
Thermus thermophilus SG0.5JP17-16
Pathway
tts03410
Base excision repair
tts03430
Mismatch repair
tts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ththe16_1181
03430 Mismatch repair
Ththe16_1181
03440 Homologous recombination
Ththe16_1181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tts03400
]
Ththe16_1181
DNA repair and recombination proteins [BR:
tts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ththe16_1181
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ththe16_1181
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ththe16_1181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2399
Rhamno_transf
Motif
Other DBs
NCBI-ProteinID:
AEG33588
UniProt:
F6DH97
LinkDB
All DBs
Position
1135285..1137285
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AA seq
666 aa
AA seq
DB search
MRDRVRWRVLSLPPLAQWREVMAALEVGPEAALAYWHRGFRRKEDLDPPLALLPLKGLRE
AAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLME
RVPEHLEASDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPD
LKEKPTGAGVAFLLLWALHERLGLPPPLEYADLAAVGTIADVAPLWGWNRALVKEGLSRI
PASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLLLTDDAAEAQALV
GELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVF
LVAQGKGTVRSLAPISAVEALRSAEDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAAR
FPDPVREVALLDLLPEPGLLPQVFRELALLEPYGEGNPEPLFLLFGTPEEARRLGEGRHL
AFRLKGVRVLAWKRGDLALPPEVEVAGLLSENAWNGHLAYEVQAVDLRKPEALEGGIAPF
AYPLPLLEALARARLGEGVYVPEDNPEGLDYARKAGFRLLPPEEAGLWLGLPPRPVLGRR
VEVALGREARARLSAPPVLHTPEARLKALVHRRLLFAYERRHPGLFSEALLAYWEVNRVQ
EPAGSP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccgggtccgctggcgggtgctttccctccctcccctcgcccagtggcgggag
gtgatggcggccttggaggtggggccggaggccgccctggcctactggcaccggggcttt
aggcgcaaggaggacctggacccccccctcgccctccttcccctcaagggcctgagggag
gcggcggccctcctggaggaggcgctccgccaggggaagcggatccgcgtccacggggac
tacgacgccgacgggctcacgggcacggccatcctggttcggggcctcgccgccttgggc
gccgacgtccaccccttcatcccccaccggctggaggaagggtacggggtgctgatggag
cgggttcccgagcacctcgaggcctcggacctcttcctcaccgtggactgcggaatcacg
aaccacgccgagctcagggagcttttggaaaacggggtggaggtgatcgtcaccgaccac
cacacccccggcaagacccctccccccggcctcgtggtccaccccgccctcaccccggac
cttaaggagaagcccacgggggcgggggtggccttcctcctcctctgggccctccacgag
cgcctgggccttcccccacccctggagtacgccgacctcgccgcggtgggcaccatcgcc
gacgtggcccccctttggggctggaaccgggccttggtgaaggagggcctttcccgcatc
cccgcctcctcctgggtggggctcaggcttctggccgaggcggtggggtacacggggaag
gcggtggaggtggccttccgcatcgccccccggatcaacgcggcaagccgcctcggggag
gccgagaaggccctaaggctcctcctcaccgacgacgcggccgaggcccaggccctcgtg
ggggaactccaccggctgaacgcccgccgccagaccctggaggaggccatgctcaggaag
ctcctcccccaggcggaccccgaggccaaggccatcgtcctcctggaccccgaggggcac
ccgggggtgatgggcatcgtggcgagccgcatcctggaggccaccctccggcccgtcttc
ctggtggcccagggcaaggggacggtgcggagcctcgcccccatcagcgccgtggaggcc
ctaaggagcgccgaggaccttcttttgcgctacggggggcacaaggaggcggcgggcttc
gccatggacgaggccctctttcccgccttcaaggcccgggtggaggcctacgccgcccgc
ttccccgaccccgtgcgcgaggtggcccttttggacctgctcccggagcccggcctcctc
ccccaggtcttccgggagctcgcccttttggagccctacggcgagggaaaccccgagccc
ctcttcctcctcttcggtaccccggaggaagcccggcgcctcggggagggccgccacctc
gccttccgcctgaagggggtgcgggtcctggcctggaaacggggggacctcgccctgccc
ccggaggtggaggtggcgggcctcctcagcgagaacgcctggaacggccacctcgcctac
gaggtccaggcggtggacctgcgaaagccagaggcgctggagggcgggatcgcgcccttc
gcctaccccctgcccctcctcgaggccctggcccgggcccgtctgggggaaggggtctac
gtccccgaggacaaccccgaggggctggactacgccaggaaggcgggcttccgcctcctc
ccccccgaggaggccgggctttggctcggcctccccccgaggccggtcctgggcaggcgg
gtggaggtggccctggggcgggaggcgcgggccaggctttccgccccccccgtcctccac
acccccgaagcccggctcaaagccctcgtccaccgccgcctcctcttcgcctacgagcgc
cgtcacccgggtctcttcagcgaggccctcctcgcctactgggaggtgaaccgtgtacag
gagcccgcgggaagcccatga
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