Thermothielavioides terrestris: THITE_134990
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Entry
THITE_134990 CDS
T02228
Name
(RefSeq) histone deacetylase-like protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03082
ATP-dependent chromatin remodeling
ttt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
THITE_134990
03083 Polycomb repressive complex
THITE_134990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_134990
Enzymes [BR:
ttt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
THITE_134990
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
THITE_134990
HDAC complexes
Sin3A-HDAC complex
THITE_134990
BRAF-HDAC complex
THITE_134990
REST complex
THITE_134990
SHIP complex
THITE_134990
MiDAC complex
THITE_134990
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
THITE_134990
Heterochromatin formation proteins
Other heterochromatin formation proteins
THITE_134990
Chromatin remodeling factors
NuRD complex
THITE_134990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
11519534
NCBI-ProteinID:
XP_003656951
JGI:
Thite2_134990
UniProt:
G2RCI0
LinkDB
All DBs
Position
5:complement(join(2909728..2910606,2910676..2911217,2911306..2911606,2911695..2911904))
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AA seq
643 aa
AA seq
DB search
MTKTTDPAGVERSRPLYYRLNTPKKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVMN
YDIYRFMEIYRAKPAVTSEMTQFHTDEYIEFLQKVTPDNMDSFMREQTKYNVGDDCPVFD
GLFEFCGISAGGSMEGAARLNREKCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELL
RFKKRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGIGNGKYYAV
NFPLRDGIDDVSYETIFEPVIEAVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMRGHANC
VNYVRSFGLPTLVLGGGGYTMRNVARTWAYETGRLIGVEMDSVLPYNEYYEYYGPDYELD
VRASNMENANSYEYLEKIKAAVIENLKRTAHAPSVQMQDVPRQGLGTSDEQDAEMDDRDE
DENKDVRVTQRQWEKRVEREDEFEDSDDENLARVNGSYKAIGRSRQETNFRNAKKDDDAM
DIDTGVASHGEPATEAAANNDDTMIDEALAEVLAETEKADAEKPAAKEQAPDGENAKVDG
DGDVDMAEPSAADEKPTDATIKKEEVEGISAAAAAPTKTPPADEADATAGGDAKAAAAKQ
RASPSPVAGGADAKPAEAVASAEPAEKAPDAASPRAGDEQAKA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacaaccgacccggcgggtgtcgagcgctcccgcccgctgtactaccgcctc
aacaccccgaagaagagggtcgcttatttctacgactccgacattggcaactatgcctac
gtgaccggccacccgatgaagccgcaccgtattcgcctggcccacagcctggtgatgaac
tacgacatctaccggtttatggagatctaccgcgcgaagccggctgtgacgtccgagatg
acgcagtttcacaccgacgagtacatcgagttcctccagaaggtcacgcctgacaacatg
gactcctttatgagagagcagaccaagtacaatgtcggcgatgactgcccagtctttgac
ggcctcttcgagttctgcggcatcagcgcaggcggcagcatggagggtgcggcccgcctc
aaccgcgagaagtgcgacattgcgatcaattgggcgggtggtcttcaccacgcgaagaag
agcgaggctagcggtttttgctacgtcaatgacatcgttcttgccattctcgagttgctc
cgattcaagaagcgcgttctctacgtcgacattgacgtccaccacggcgatggcgtcgag
gaggccttctacaccaccgatcgcgtcatgaccgtttcgttccacaagtacggagagtac
ttccccggcaccggcgagcttcgcgacatcggcatcggcaacggcaagtactatgccgtg
aacttcccgctccgcgacggcatcgacgatgtctcgtacgagaccatttttgagcccgtc
atcgaggccgtcatgaagtactatcagccggaggccgttgttctccagtgcggtggcgat
agcctctccggcgaccgcttgggttgcttcaacctcagcatgcgcggtcacgcaaactgc
gtcaattacgtgcgctctttcggtctgcccactcttgtgcttggcggcggtggctacacg
atgcgcaacgttgcccgcacgtgggcctacgaaaccggccgcctcatcggcgtcgagatg
gactcagtcctgccgtacaatgagtactacgaatattatggtcccgactacgagcttgat
gtgcgcgcctccaacatggagaacgcgaacagctacgagtacctcgagaagatcaaggcc
gcagtcatcgagaacctgaagcggaccgctcacgccccctccgtgcagatgcaagacgtt
cctcgccagggtctgggcacctctgacgaacaggatgccgagatggatgaccgcgatgag
gacgagaacaaggacgtccgcgtgacgcagcgtcagtgggagaagcgcgttgagcgcgaa
gacgaattcgaggactctgacgatgagaatctcgcccgcgtcaatggctcctacaaggcc
atcggccgttcccgtcaggagaccaacttccgcaacgccaagaaggacgatgatgcaatg
gacatcgacaccggcgttgcttcccacggcgagcctgccaccgaggcggctgccaataac
gacgacaccatgatcgacgaggccttggccgaagttctcgccgagaccgagaaggctgac
gccgagaagcctgccgcgaaggagcaggcccccgacggcgagaatgccaaggtcgacggc
gacggggacgttgatatggccgagccctccgccgccgacgagaagcccaccgacgcgacc
attaagaaggaagaagtcgagggcatctcggctgccgcggcggcgcccaccaagaccccg
ccggccgacgaggccgacgcgactgcgggcggcgacgccaaggccgctgctgcgaagcag
cgggcttctccttcccctgtcgccggcggcgctgatgccaagccggccgaggcggttgct
tccgccgagccggcggagaaggcgcccgacgccgccagccctcgggccggcgacgaacag
gccaaggcctaa
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