Thermothielavioides terrestris: THITE_2110518
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Entry
THITE_2110518 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03022
Basal transcription factors
ttt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
THITE_2110518
09124 Replication and repair
03420 Nucleotide excision repair
THITE_2110518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2110518
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2110518
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
THITE_2110518
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
THITE_2110518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
11523961
NCBI-ProteinID:
XP_003650735
JGI:
Thite2_2110518
UniProt:
G2QT73
LinkDB
All DBs
Position
1:join(8513812..8513941,8514002..8515413)
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AA seq
513 aa
AA seq
DB search
MSVAPQSYQLSDYLEKLPGTTFRKLYQQPSTAFAIFRRMLPPLAKIFVQALLYMPSPLLL
SELDVWVRPEAKMHRDRALSILRSLHIVQISPPGKDKPQEIQLTTNFKNSLRLALEGGGT
HNSFGVPSTLPVDPRIDIAHLDQYARKKWEDILHYVVNSVPVHAEGGGGGGSGGGPKASV
KDLLLAGRLVERRPDTRGGVAITQAGFTFLLQEANAQVWTLLLLWLEAADHSKAAAAAAG
DHAKGAASQGKPDSIDMLSFLFMLASLELGRAYDTDSLTETRRNMLPALVDFGLIYIPRE
DTRQYFPTRLATTLTSSASALRSVSSGFSAAAANNPGDAASLGMTPDTTPTKGSLIIETN
YRLYAYTSSPLQIAVLALFTQLNMRFAGMVTGRLTRDSIRRAISFGITADQIISYLASHA
HEQMTRAAAAAGRPVLPPTVVDQIRLWQLENERMRTTAGFLFKDFDSPEEYVSLSGYAEE
IGVLVWKSDRKRVFFASKFEQLRDYLKSRKKAE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgcgccgcagtcgtaccagctctccgactacctggagaagctgcccggcacc
actttccgcaagctctaccagcagccgtcaactgcctttgccatcttccgccgcatgctg
ccgcccttggccaagatctttgtccaggcgctcctctacatgccgtcgcccctgctgctc
tccgagctcgatgtctgggtgcgtcccgaggccaagatgcaccgcgaccgtgccctttcg
attctgcgctctctgcacattgtccagatctccccgcccggcaaggacaagccgcaggag
atacagctcacgacaaatttcaagaacagtctgcgcctggccctcgagggtggcgggaca
cacaacagcttcggcgtgccgagcaccctgcccgtcgacccccggatcgacatcgcccac
ctcgaccagtacgcccgcaagaaatgggaggacatcctgcactacgtcgtgaatagcgtg
cccgtgcatgccgagggaggaggcgggggcggctcgggcggcggccccaaagccagcgtc
aaggacttactgctagcaggacgtctggtcgagcgaagacccgacacaagaggcggcgtc
gccatcacccaggcgggcttcaccttcttgctccaggaagccaacgcccaggtctggacg
ctgctcctcctctggctcgaagccgcagaccactccaaggcagcagcagcagcagcaggg
gaccacgccaaaggggcggcgagccagggaaagcccgacagcatcgacatgctctcgttc
ctattcatgctcgcctcgctcgagctaggccgcgcctacgacaccgactcgctcaccgag
acgcggcgcaacatgctcccggcgctcgtcgacttcggcctgatctacatcccgcgcgaa
gacacgcgccagtacttcccgacgcgcctcgccacgacgctgacgagctccgcctcggcc
ctgcgctccgtctcgtcgggcttctccgccgccgccgccaacaacccgggcgacgcggcc
agcctcggcatgacgcccgacacgacgccgaccaagggctccctcatcatcgagaccaac
taccggctgtacgcctacacgtcgtcgccgctgcagatcgccgtgctggccctgttcacg
cagctcaacatgcgcttcgcgggcatggtcacgggccggctgacgcgcgactcgatccgc
cgcgccatcagcttcggcatcaccgccgaccagatcatcagctacctggcctcgcacgcg
cacgagcagatgacccgcgcggccgccgccgcggggcggcccgtgctgccgcccactgtc
gtcgaccagatccgcctgtggcagctcgagaacgagcggatgcgcaccaccgccggcttc
ctgttcaaggacttcgactcgcccgaggagtacgtctcgctgagcggctacgccgaggag
atcggcgtgctggtgtggaagagcgaccggaagcgcgtcttcttcgccagcaagttcgag
cagctgcgggactacctcaagagtcggaagaaggccgagtga
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