Thermothielavioides terrestris: THITE_2117942
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Entry
THITE_2117942 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt04138
Autophagy - yeast
ttt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
THITE_2117942
04148 Efferocytosis
THITE_2117942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ttt04131
]
THITE_2117942
Membrane trafficking [BR:
ttt04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
THITE_2117942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Vps39_1
zf-RING_5
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
11518240
NCBI-ProteinID:
XP_003654759
JGI:
Thite2_2117942
UniProt:
G2R690
LinkDB
All DBs
Position
3:complement(join(4227824..4228816,4228875..4230579,4230634..4231619,4231681..4231707,4231779..4232177))
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AA seq
1369 aa
AA seq
DB search
MTETPPLPGDNDPHDGATEPAPGSERVISQGSSTPNPSPSSQLGHLSNSAKEAEDAPGRM
MEQSTDEEDGDDGDDGGDDGEEEEEEEEEEEEDDEEEEDEEPKLKYARLTQHLGPVYRNG
DATSAFLVAGDKMIVGTHNGNIHVVQLPAFQSLRVYHAHSASVTSLSISPFPPPLPASKP
DVAARSVSDSPQRPATATSNSHSSPAATSRRPKEQQVVPNTPSNNIYIATSSTDGNICVQ
SLIDVKDVQLRNFARPVQAVALSPEYKHDRTYLSGGLAGQLILTVGAPNGRSTAMTTGAT
AHAAGWLGGMVGAGTGRDTVLHSGEGTINTIKWSLSGRYVVWLNEHGIKIMRTKLHLDNA
DAEDAWKRIGHIDRPQTDEWETMASVWKGRAEWIDEQAVEHDEVAAEHREAVLSPAAESL
KRQQLKNGKKAERLLVGWGGTIWIIHVHPGGIGAGKNAGERSAGRAEIVKILRMDCIISG
ISLYTQNLLLVLAYCLPDEEEEDNEASEPSRGHRHALSESSTGSGPSGGIQRKQNRQPPE
LRLIDLSSQAEVDKDGLTVSRFERLSSNDYHLGILPAQNAAAAASSKGALEALAGLGTDV
LNAALNPMSLFSSAASVMSKGSDGASASNVPPSAARSGGASVHPHLLKPGVKIFIHSPYD
CILATRRDLSDHLAWLLDHNQYQEAWTLVDQHPEIMSAAPDATPTSPQHTQTTDDFYDET
ASVAEGMRSFNSAAEKEKRRIGELWIQDLIEAGDWALAGQICGKVVATPDRWEKWVWTFA
GANKFDEIVNYIPSERTRPPMRGTLYEVMLGHYLQVSKPRFRDLLDRWSPDLYDVSAITS
ALQDQLMYRDVREDSVEDGEVGRDWRIVMESLAKLHEASGRTREALRCHIKLQDADSAMR
LIKEGHLADAVADDIPSFISLRVPQDHAAKMSRAELEQATAEAITLLVDEAQHGLVKPDV
VVAQLQDKKLDLYTFFYLRGLWRGEGMHEHPGETQARLVTDSQSLVDQFADLAVHLFAIF
DQSLLMEFLKTSTAYAFEKAAQECEAHNYVPELVYLYSKTGQTKRALYLIIDRLADVSRA
IAFAKEQDDPDLWEDLLTYSMDKPRFIRALLEEVGTAIDPITLVRRIPEGLEIEGLREGL
KHIMKEHEIQHSICEGAARVLRSEVAAAQALLRSGQRRGVKFEVVPAPKAGSSTKPPTFA
GTAAPASGHADPPPAAKDKTKSSATTNGEAAYPSGTTPSSNTPTTSTAAAAADPKEAAPK
KWTPGHCADCLAPFCPWETETLVGFACGHVFHLSHLLQRLHAPGGGGEEVDRLATLSGVG
IGVAGEEPSAAAAAAAAHLVGPKVAHARLLRDRVAGGCPVCVSGEKGGR
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaccccgccactgcctggcgacaacgatccgcacgatggggccacagaacca
gcgcccggcagcgaacgcgtgatcagccaaggcagcagcacgccaaacccgagcccgtcc
tcccagcttggacatctctcgaatagcgccaaggaagctgaagatgcaccgggcagaatg
atggagcagtcgacggacgaagaggatggcgatgacggcgacgacggtggcgacgacggg
gaggaggaagaagaggaggaggaggaagaggaggaagacgacgaagaggaggaggacgaa
gagccgaagctcaagtacgcgcgcttgacccaacacctcgggcctgtctaccgaaatggc
gatgcgaccagcgcctttcttgtcgcaggggacaagatgattgttgggactcacaatggc
aacatccacgtcgtccagctaccagcattccagtctttgcgagtctaccacgcccactcc
gcctccgtcacctcgctgtcgatatccccgtttccgcctccactccctgcctccaaacct
gacgtggctgccagatcggtttctgacagtcctcaacgaccagccacggccacgagcaac
agccattcctcgccagctgccacctcccgaagaccgaaagagcagcaggtcgtgccgaac
acaccgtcgaataatatctacatcgccacgtcctccacggatggcaacatctgcgtgcag
tcgctgattgacgtcaaggacgtgcagttgcggaactttgcccgccccgtgcaggccgtc
gccctgtcgcccgagtacaagcacgaccggacgtatctgtcgggcggactggcgggccag
ctcatcctgaccgtcggtgcgccaaatggccggagcacggccatgaccacaggtgccacc
gcacatgcggctggctggctgggcggcatggttggagccggcaccgggagggacaccgtc
ttgcactcgggcgaggggaccatcaacaccatcaaatggtccctctcggggcgctacgtg
gtctggctcaatgaacacggcatcaagatcatgcgcacaaagctccatctcgacaacgcc
gacgccgaagatgcctggaagcggataggccatatcgacaggcctcagacagacgagtgg
gagaccatggccagtgtgtggaaggggcgggcggagtggatagacgagcaggcggttgag
cacgacgaggttgccgccgaacaccgcgaggccgtgctgtctccagcggctgagagcctg
aagcggcaacagctcaagaatggcaagaaggccgagcgacttctcgtggggtggggtggc
accatttggatcatccacgtccaccccggcggcatcggtgcgggcaagaacgctggggag
aggtccgctgggcgggcggagattgtaaagatactgcggatggattgcatcatttccggc
atttcgttatatacccagaaccttttgttggttcttgcttactgcttgcccgacgaggag
gaagaggacaacgaagccagcgagccatctcgaggccacaggcatgcgctatctgagagc
tctaccgggagcgggccttccggagggatccagcgaaagcagaacaggcagccgcccgaa
ctgagactcatcgatttgtcgtcgcaggccgaggtggacaaggacggattgacagtcagc
cgctttgagaggttatcatcgaacgactatcacctcggcatcctgcccgcccaaaacgcc
gctgccgcggcatcatccaaaggcgccctggaggcgctcgcagggctaggcactgacgtc
ctaaacgctgccctgaaccccatgtcactattcagctccgccgcaagcgtcatgagcaaa
ggcagcgatggcgcctcggcctccaacgtgcctccttcggcggcccggtcaggcggtgcc
tcggtccacccgcatctgctcaagccaggggtcaaaatcttcatccacagcccgtatgac
tgcatcctggctaccaggcgcgacctcagcgaccacctggcatggctcctagaccacaat
caataccaagaagcatggacgctagtcgaccagcatcccgagatcatgtcggcggctccc
gatgccacgccgacatcgccgcaacacacgcaaaccaccgacgacttctatgacgagact
gcgtcggtcgccgaaggcatgcggtccttcaactcagctgcagagaaagagaagcggcgg
attggcgagctgtggatacaagatctcatcgaggctggcgactgggctctggccgggcag
atatgtggaaaggtcgtcgccacgcccgaccgttgggagaaatgggtgtggacgttcgcc
ggtgcgaacaagttcgacgagattgtcaactacatacccagcgaacgcacgcggcccccc
atgcgaggcaccctctacgaggtcatgctcgggcactacctgcaggttagcaaaccccga
tttcgagacctgctggatcggtggtcgcccgacctgtacgacgtgagtgccatcacgtcg
gctctgcaggaccagctcatgtaccgagacgtgcgggaggatagtgtcgaggacggagag
gtcggccgggactggcggatcgtcatggagagcttggccaagctgcacgaggcgagcggc
aggaccagggaggcgttgaggtgtcacatcaagctgcaagatgccgactcagcaatgcgg
ctgatcaaggagggccacctcgcagacgccgtagctgacgacatcccgagcttcatcagc
ctgcgcgtccctcaagaccacgccgcgaagatgagccgcgcagaattggagcaggccact
gccgaggccatcactttactggtagacgaggcacagcacggactggtaaagccggacgtt
gtcgtcgcgcaactgcaggacaaaaagctggatctgtacacgttcttctacctcaggggt
ctctggcggggagagggcatgcacgagcacccgggcgagacacaagctcgcctcgtaacc
gacagccagtcgctggttgaccagtttgccgaccttgctgtccatctcttcgccattttc
gatcaatccctgttgatggaattcctcaagacctcgaccgcgtatgcattcgaaaaggca
gcgcaagaatgcgaagcgcacaactacgtccccgagcttgtctacctctactccaagacc
ggccagaccaaacgggcgctttatctcatcatcgaccgcctcgccgacgtcagccgcgcc
atcgccttcgccaaggagcaggacgacccggacctctgggaggacctgctcacgtacagc
atggacaagccgcgcttcatccgcgcgctgctcgaggaggtcggcacggcgatcgacccc
atcacgctggtgcggcgcatccccgagggcctggagatcgagggcctgcgcgagggactc
aagcacatcatgaaggagcacgagatccagcacagcatctgtgaaggtgcggcgcgcgtg
ctgcgcagcgaggtggccgccgcgcaggcgcttctgcggagcgggcagcgcaggggcgtc
aagttcgaggtcgtgccggcgccgaaagccgggagcagcaccaagccgcccaccttcgcc
ggtactgctgcccccgcctccgggcatgcagacccgccgccggcagccaaggacaaaacg
aagtcttcggctaccacaaatggcgaggccgcctacccatccggcacaaccccctcttcc
aacacccccaccaccagcaccgccgccgctgccgccgaccccaaagaagcagcacccaag
aagtggacgccgggccactgcgcggactgcctcgcgccgttctgcccctgggagaccgag
acgctcgtcggcttcgcctgcggccacgtcttccacctgagccacctgctgcagcggctg
cacgcaccgggcggcggcggcgaggaggtcgaccgtttggcaacgctgagcggcgtcggc
atcggcgtcgcgggggaagagccgagcgcggcggcggccgccgccgcggcgcaccttgtc
ggccccaaggttgcgcatgcgcggctgctgcgcgatcgggttgctggtggctgtccggtt
tgtgtgagcggggagaaagggggtcggtga
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