Triticum urartu (red wild einkorn wheat): 125540334
Help
Entry
125540334 CDS
T08232
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03022
Basal transcription factors
tua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125540334
09124 Replication and repair
03420 Nucleotide excision repair
125540334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125540334
03400 DNA repair and recombination proteins [BR:
tua03400
]
125540334
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125540334
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125540334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
EAD1
Motif
Other DBs
NCBI-GeneID:
125540334
NCBI-ProteinID:
XP_048559899
LinkDB
All DBs
Position
2:737640177..737646539
Genome browser
AA seq
451 aa
AA seq
DB search
MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSFPPLAKKYVIQMLYVSSPMPA
AAMQEWVLDEYASKHKVAIDRLLQLRVFVEVRDRRKEVSYKMNNKFQANMQKYLVSGGCL
PREPLPISVTGRLPTLVELENYALDQWECFLLQLINSSQVEKGTTFSSSMMKTFQRGLLS
SRDGEAAKLSENGFQFLLMETNAQLWYIMREYISSAEERGVDPTDLISFLLELSFHTQGA
AYSLSTLTEVQRVAIMDLMELGLVKLQQGRKDSWFIPTKLATNLSSSLSDSAASKEGIVV
VETNFRLYAYSASKLHCEILRLFSRVEYQLPNLIVGAITKESLYGAFDNGITAEQIISFL
QQNAHPRVIDKIPIVPENVTDQIRLWENDRNRVEMVLSHVYEDFPSKDMFEQCCDHARDN
GYLLWEDAKKMRLIVNAEFHQEMREFLRRQR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtaatggtggtcgcacggaacttcatggacatggtggctgcactgcctgct
gccaaactcgatatgctctacgattccgccttcatctgtgaggctgtactcaggtcgttc
ccaccgctggcaaagaagtacgtaattcagatgctgtacgtgtcgtccccgatgcctgct
gcggctatgcaggagtgggtgctggatgagtatgcctccaagcacaaggttgccatcgat
aggctgctccagctcagggtctttgtggaagtacgtgacagaaggaaggaggtgagctac
aagatgaataataagtttcaggctaacatgcaaaagtatttggttagtggcgggtgtttg
ccaagggaaccgctaccaatcagtgtcactggcagattgcctacactggtggaactagaa
aattatgctcttgatcaatgggagtgcttcttgctgcaattgatcaactcgtctcaagtt
gagaaagggaccactttcagctcgtctatgatgaagacgttccagcgaggtcttctgagt
tcaagggatggtgaagctgcaaagttaagtgagaatggcttccagtttctgctgatggag
acaaatgcacagctttggtatataatgagagaatacatttcatccgcagaggaacgtggg
gtggaccccacggacttgatatcatttctattggagcttagttttcatacacaaggagcg
gcttacagcctaagtactctgacagaagtccaaagagttgcaattatggatctgatggag
ctcgggttagtcaaactgcagcagggccggaaagatagctggttcatacctacaaaattg
gctacaaatctctcatcgagcttgtcagattcagctgccagcaaagagggtattgtggtt
gtggagacaaactttaggttgtatgcgtactctgcttccaagctgcactgtgaaattcta
cgtcttttttcaagggtagagtatcaactcccgaaccttattgtgggagctattacaaaa
gaaagtctgtatggtgcatttgataacgggatcactgctgaacagataatttcattcctt
cagcaaaatgcccaccctcgtgtcatcgacaaaatacctatagtcccagagaatgttaca
gatcagattaggctgtgggagaatgaccgtaacagggtcgagatggtcctgtcacacgta
tacgaagattttccgagcaaggacatgtttgagcaatgctgtgaccacgcaagggataac
gggtacttgctgtgggaggacgcgaagaagatgcggttgatagtgaacgcggagttccac
caagaaatgcgggagttcctgcgcaggcaaagatga
DBGET
integrated database retrieval system
