Triticum urartu (red wild einkorn wheat): 125553559
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Entry
125553559 CDS
T08232
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua00040
Pentose and glucuronate interconversions
tua01100
Metabolic pathways
Module
tua_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125553559
Enzymes [BR:
tua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125553559
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
125553559
NCBI-ProteinID:
XP_048573289
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Position
4:complement(65945816..65947567)
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AA seq
401 aa
AA seq
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MPARRRTSLALLAHLCVSLASAASYSVVDYGAVADGRTDCAGAFLRAWAAACGTEGEGPA
AVVVPAGEFLVSRARFSGPCRSGAVAVSIAGTVLAPVPYAGAQLWIVFQNVDGVSVIGGT
LDGRGQAYWACRRAGGGSSCPAATRSLTIYRSRNVVIQGLTSVNSAGIHVTVQASTGVAI
VDTVVSAPGDSPNTDGIHIKQSSDITIRNAVVGTGDDCISMVEGSSDVWIQGVTCGPGHG
ISIGSLGDTPEQVAVRNITVKAVTLAGTTNGLRIKSWAKANSGLVDGVAFSDVVMRNVRN
PIIVDQNYCPGNVSCPTEGSGIKITNVSYTDVEGTSATPVAVRFNCSPSQPCTGITMRNV
WLGYGERRRAAESFCRNAYGVAYGHVVPPSCLAHQEMFCYK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacgacggcgcaccagccttgctctcctcgcccacctgtgcgtgtcgctcgcc
tccgcggcgtcctacagcgtcgtcgactacggcgccgtggccgacggccggacagactgc
gcaggggcgttcctccgcgcgtgggccgcggcgtgcggcacggaaggcgagggcccggcc
gcggtggtcgtgccggcaggcgagttcttggtttccagggcgaggttcagcgggccgtgc
aggagcggcgcggtggccgtgagcatcgcgggcacggtgctcgcgcccgtgccgtacgcc
ggcgcgcagctctggatcgtgttccagaacgtggacggggtgtccgtcatcggaggcacg
ctcgacggcaggggccaggcgtactgggcgtgccggagagccggcggcggctcctcttgc
cccgccgccaccaggtcgttgacgatctaccggtcgaggaacgtggtgatccaaggcctg
acgtcggtgaacagcgcgggcatacacgtcaccgtgcaggcgagcaccggcgtggcgata
gtggacacggtggtgtcggcgccgggggacagccccaacaccgacggcatccacatcaag
cagtcgagcgacatcaccatccggaacgctgtcgtcggtaccggcgacgactgcatctcc
atggtcgagggctcgtcggacgtctggattcagggcgtcacgtgcggccctgggcacggc
atcagtattgggagcctgggagacacgccggagcaggtggccgtgcggaacatcaccgtg
aaggccgtgacgctcgccgggacgaccaacgggctgcggatcaagtcgtgggccaaggcc
aacagcgggctcgtcgacggcgtcgccttctcggacgtggtcatgaggaacgtccgcaac
ccgattatcgtcgaccagaactactgccccggcaacgtcagctgccccaccgagggatcg
gggatcaagatcaccaacgtgtcatacacggacgtcgaggggacgtcggcgacgccggtg
gcggtgcggttcaactgcagcccgagccagccgtgcaccggaatcaccatgcggaacgtt
tggctgggctacggggagcggcggcgagcggccgagtccttttgccggaacgcgtatggg
gttgcgtatgggcacgttgtcccgccgagttgcctggcccaccaggaaatgttttgctac
aagtga
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