Tupaia chinensis (Chinese tree shrew): 102468042
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Entry
102468042 CDS
T02978
Symbol
THOC1
Name
(RefSeq) THO complex 1
KO
K12878
THO complex subunit 1
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013
Nucleocytoplasmic transport
tup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102468042 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
102468042 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102468042 (THOC1)
03041 Spliceosome [BR:
tup03041
]
102468042 (THOC1)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102468042 (THOC1)
Spliceosome [BR:
tup03041
]
Complex C
Other components
EJC/TREX
102468042 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102468042 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
102468042
NCBI-ProteinID:
XP_006151668
LinkDB
All DBs
Position
Un
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLCTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSTCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPARVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDVKMRAKQLLVAWQDQEGAHATPETLISALNKSGLSDLAESLTNDNETSS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccactcttcagtttgcccgaagcgcgaacgcggtttacgaaatct
accagagaggccttgaacaacaaaaatattaagccattgttgtgtacctttagccagtta
cctggcagtgaaaatgaaaaaaaatgtaccctggaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcaacatgtgaaaatgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacgttctattccgctgggaaaaattatttactacgtatgtgc
aatgatctcctaagaagattatcaaaatcccagaatacagttttctgtggacgaattcag
ctctttttggctagacttttccctctatctgagaaatcaggtcttaacttgcagagtcaa
tttaacctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggccag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgac
gaagcaccaacaacttgctccattccaattgattataacctgtatcgaaaattctggtca
cttcaagattacttcaggaaccctgtgcaatgctatgagaagatttcatggaagactttt
ctcaaatattcagaagaagttttagctgtttttaagagttataaattagacgatactcag
gcctcaaggaagaagatggaagagttgaaaacaggaggggaacatgtgtattttgcaaaa
tttttgacaagtgaaaagttgatggacttgcaactgagtgacagtaactttcgtcgacac
atcttgttgcagtatctcatcttattccagtatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgaacaatcactctggattgaagatactacaaaatcagtc
tatcaactactatctgaaaaccctcccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaattcatggaaaaatgaaggctgtccaagttttgta
aaagaaagagcatcagataccaagcctgcaagagtagtacggaagagaacagcaccagaa
gatttcctagggaaaggacccaacaaaaaaattctgatggggaatgaggagttaacaaga
ctttggaatctctgtcctgataatatggaagcttgtaaatcagagacacgggagtacatg
ccaacattggaggagttctttgaagaagccattgaacaggcagacccagaaaacatggtt
gaaaatgaatataaggctgtgaacaattcaaattatggttggagagctctgagactatta
gcacgaagaagccctcatttcttccagccaaccaaccaacagtttaaaagcttgccagag
tatcttgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgacgttcggagagacaaacctgtaacaggggaacaaatagaggtatttgccaacaag
ctgggtgaacagtggaagattctggctccctacttggaaatgaaggactccgaaattagg
cagattgagtgcgacagtgaagacgtgaagatgagagcaaagcagctcctggtggcctgg
caagatcaggagggagcacatgctacgcccgagactctgatcagtgcgctgaataagtct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaagtagttag
DBGET
integrated database retrieval system
