Tupaia chinensis (Chinese tree shrew): 102471145
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Entry
102471145 CDS
T02978
Symbol
BLM
Name
(RefSeq) Bloom syndrome RecQ like helicase
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03440
Homologous recombination
tup03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102471145 (BLM)
03460 Fanconi anemia pathway
102471145 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tup03032
]
102471145 (BLM)
03400 DNA repair and recombination proteins [BR:
tup03400
]
102471145 (BLM)
Enzymes [BR:
tup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102471145 (BLM)
DNA replication proteins [BR:
tup03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102471145 (BLM)
DNA repair and recombination proteins [BR:
tup03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
102471145 (BLM)
Bloom's syndrome complex (BTR)
102471145 (BLM)
FA (Fanconi anemia) pathway
102471145 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
Motif
Other DBs
NCBI-GeneID:
102471145
NCBI-ProteinID:
XP_006152898
LinkDB
All DBs
Position
Un
AA seq
1419 aa
AA seq
DB search
MAAVPQNNLQEQLERHSARKLTNKLSLSKPKSLGFTFKKKTSSDNDVSITNVSVAKTPVL
SDKDVNVSEAFSFSEPLSHATDQQIKINEFSKNAPAGQQPSRVGSKPSWQIPQEVLCTLQ
NTSVTKKPHDAAFKKLEFSSSLDSFSTINDWDDMDDFVTSGSSKAFVTPSKDHFVRVSTA
QKSKRAKRNFSKAELPKTNTEKADLNSSLSESKQVDLTREEKEDSECLSSDVICISDGPL
SKVLVSEDTHESHSLETQLRDEKNNSEEKENLEEAELHSTENVPCVELDDDDYDIDFVPP
SPEEEIISTASSSLKCFSVLKDLDTSDRKKSVLSISDDLSSEHEKMTTQEPHPETSTDYD
ARQLSLQQQLIDVMDHICKLVDSISADELKALDCGNELLQQRNIRRKLLAEADFTRYDAS
LLNSVWRCRPNLPGSLMEGDSCPMENSIKVLYFLHFPSNSFSSGDCLLTTTLGKTGVSAT
TKNPFESLLFNSHLQKSFVSNNWAKTPRIEKRNESSYFPGNVLTSTAVKDQNKHTASMND
LKSETQASYDIDNFDIDDFDDDDDEWENIMQNLAANKSSTAACQPAKEGRPIKVVSERFF
SAKTNCLPVASTAQNKNFPESIQNYTDKSTRNLASQNLNHERFQSLNLPHTKEMMKIFHK
KFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIV
DQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLE
NLYERQLLARFVIDEAHCVSQWGHDFRQDYRRMNMLRQKFPSVPVMALTATANPRVQKDI
LTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLDWIRKHHPYDSGIIYCLSRHEC
DTMADTLRKDGLAALAYHAGLSDSSRDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFV
IHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILMEKDGNRHTRETHFN
NLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKEYPEVSCDNCCKRKDYKTRDVTDDV
KNIVKFVQEHSSSQRTKNVSSSGRFTMNMLVDIFLGSKSAKIQSGIFGKGSAYSRHNAER
LFKKLILDKILDEDLYINANDQAIAYVMPGNKAQTVLNGHLKVEFMETENSSSVKKQKAL
VAKVSQREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTATLKKLAGSLYLXXXXXXXXX
XLLQIDGVTEDKLEKYGAEVIPILQKYSEWTLPAEDSSPRGSLCSNRSTGRDAPTELDEE
APISSHYFASKTRNERKRKRMSASQRPKRRKTGYSGSKAKGGSTTCRKISSKAKSSNIIG
SSSALHGSQATSGASRKLGIMAPPKPINRPFLKPSYAFS
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcctcaaaataatctacaggaacaactagaacgtcactcagccagaaaa
cttactaataaattaagtctttcaaaaccaaaatctttaggtttcacttttaaaaagaaa
acatcttcagataatgatgtatccataactaatgtctcagtagcaaaaacacctgtgtta
agtgataaagatgttaatgtttctgaggccttctccttcagtgagcccctatcccatgcc
acagaccagcagataaagatcaatgagttctctaaaaatgctccagcaggacagcagccc
agcagagttggttccaaaccatcatggcagattccacaggaagttttatgcactcttcaa
aacacatcagttacaaagaaaccccatgatgctgctttcaagaaattagaattcagttct
tcactagattcttttagtaccatcaatgactgggatgatatggatgactttgttacatct
gggtcttcaaaagcatttgtgacaccatccaaagatcactttgtgagagtaagcactgct
cagaagtcaaaaagagccaagaggaacttttcaaaagctgagcttcccaagacaaacaca
gagaaggctgacttgaattcttccttgtcggaaagcaaacaggtagatttgacaagagaa
gagaaagaagactcagaatgtttaagtagtgatgtgatctgcatcagtgatggccccctt
tccaaagtgctcgtaagtgaagatactcacgaaagtcactctttggaaactcagttgaga
gatgaaaaaaataatagtgaagagaaggaaaatttggaagaagctgaattgcattcaact
gaaaatgttccatgtgttgagcttgatgatgatgactatgacatagattttgttccgcct
tctccagaagaagaaattatttctactgcttcttcctcgttaaaatgctttagtgtttta
aaggaccttgacacctctgacagaaagaagagtgtccttagtatatctgatgatctttcg
tcagaacatgagaaaatgactacacaggagcctcatccagaaaccagcacagactatgat
gctagacagttaagtttacagcagcagcttattgatgtcatggaccacatctgtaaatta
gttgattctatttctgctgatgaactgaaagctttggattgtgggaatgaactgcttcag
cagcggaacataagaagaaaacttctagctgaagcagattttactagatatgatgccagt
cttctcaactcagtgtggagatgcagacccaatttacctggtagcctcatggagggtgat
tcttgccctatggagaactctattaaggtattatattttctacactttccctcaaattct
ttctcctctggagattgtctactgaccaccactctgggaaaaacaggcgtctcagccacc
accaagaatccctttgaaagtctgttattcaattctcatttacagaagtcctttgtaagt
aacaactgggccaaaacaccaaggatagaaaaaagaaatgaaagctcttatttccctgga
aatgttctcacaagcactgctgttaaagatcaaaataaacatactgcttcaatgaatgac
ttaaaaagtgaaacccaggcatcctatgatatcgataattttgacatagatgacttcgat
gatgatgatgatgagtgggaaaatataatgcagaatttagcagccaacaagtcttccaca
gctgcctgtcaacctgccaaggaaggtcgaccaattaaagtagtatcagaaagatttttc
tcagccaagacaaactgtcttccagtagcatctactgctcagaataagaactttccagag
tctattcagaattacactgacaaatcaacacgaaatttagcatcccaaaatctgaaccat
gaacgtttccaaagccttaatttgccacatacaaaagaaatgatgaagatttttcacaaa
aaatttggcctgcataattttagaacgaatcagctagaggcgatcaatgctgcactgctt
ggtgaagactgttttatcctaatgcccactggaggtgggaaaagtttatgttaccaacta
cctgcttgtgtttctcctggcgtcaccgttgtcatttctcccttgagatcattaatagta
gaccaagttcaaaagctgacgtccttggatattccagctacatatctgacaggtgataag
actgactctgaagctacaaatatttatctccaattatcaaaaaaagacccaattataaag
cttctttatgttactccagaaaaggtgtgtgccagtaacagactgatttctactctggag
aatctctatgagaggcaactcttggcgcgttttgttattgatgaagcacattgtgtcagt
cagtggggacatgattttcgtcaggattacagaagaatgaatatgcttcgccagaagttt
ccttctgttccagtgatggcacttactgccacagctaatccaagggtacaaaaggacatc
cttactcagctgaaaattctcagacctcaggtgtttagcatgagctttaacagacataac
ctgaaatactacgtgttaccgaaaaagcctaaaaaggtggcatttgattgtttagactgg
atcagaaagcatcacccatatgactcagggataatttactgcctctccaggcatgaatgt
gacacgatggctgataccttacggaaagatggtcttgctgctttggcttatcacgccggc
ctcagtgattcctccagagatgaagtgcaacataagtggattaatcaggatggctgccag
gttatctgtgcaacaattgcatttggaatggggattgacaaacctgacgtgcggtttgtg
attcatgcatctctccctaaatccgtggagggttactaccaagaatctggcagagctgga
agagatggggaaatatctcactgcctgcttttctatacctatcatgatgtgaccagactg
aagagacttatattgatggaaaaagatggaaaccgtcatacaagagagactcacttcaat
aacttgtatagcatggtacattactgtgagaacataacagaatgcaggagaatacaactt
ttggcttactttggtgaaaatggatttaatcctgatttttgtaaagaatatccagaagtt
tcttgtgataattgctgtaaaagaaaggattataaaacaagagatgtgactgatgatgtg
aaaaatattgtaaaatttgtacaagaacatagttcgtcacaaagaacaaaaaatgtaagt
tcttcaggaagatttactatgaatatgctggtcgacattttcttggggagtaagagtgca
aaaattcagtcgggtatatttggaaagggatctgcttattcacgacacaatgctgaaaga
ctttttaagaagctgatacttgacaagattttggatgaagacttgtatatcaatgccaat
gaccaagcaattgcatatgtgatgcctggaaataaagcccaaactgtactaaatgggcat
ttaaaggttgaatttatggaaacggaaaattccagcagtgtgaaaaaacaaaaagcatta
gttgcaaaagtatctcagagggaagagatggttaagaaatgccttggagaacttacagaa
gtctgcaaatctttgggaaaagttttcggtgtccattacttcaatatttttaacactgct
acactcaagaagcttgcaggtagtctttatctnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnttgcttcaaattgatggagttactgaagataaactggaaaaatatggtgcagaagtg
attccaatattacagaaatactcagagtggacattgccagctgaggatagttccccacga
ggaagcctgtgcagcaacagaagcacgggaagagatgcccctacagagctcgatgaggaa
gcacccatatcttctcactactttgcaagtaaaaccagaaacgaaagaaaaaggaaaagg
atgtcagcctcccagaggcctaagaggaggaaaactggttacagtggttccaaggcaaag
ggggggtccaccacttgcagaaagatatcttccaaagctaaatcttccaacataattgga
tccagttcagccttgcatggttctcaagcgacatcaggagccagtaggaaattggggatt
atggctccaccgaaacctataaatagaccatttcttaagccttcatatgcattttcataa
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integrated database retrieval system
