Tupaia chinensis (Chinese tree shrew): 102488277
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Entry
102488277 CDS
T02978
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03022
Basal transcription factors
tup03420
Nucleotide excision repair
tup05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102488277
09124 Replication and repair
03420 Nucleotide excision repair
102488277
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102488277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tup03021
]
102488277
03400 DNA repair and recombination proteins [BR:
tup03400
]
102488277
Transcription machinery [BR:
tup03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102488277
DNA repair and recombination proteins [BR:
tup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102488277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
102488277
NCBI-ProteinID:
XP_014440052
LinkDB
All DBs
Position
Un
AA seq
416 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
AVSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEILLEEYNGERFCYGCQGELKDQHVYIC
SVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSERRKVRKQADRSGTRAAVAHVEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaagaacatgggaa
attcttaaagaagatgaatctggatcacttaaagctacaattgaagacattctctttaag
gcaaagaggaaaagagtatttgaacatcatggacaagttcgacttggaatgatgcgccac
ctttatgtggtagtagatggatcaagaacaatggaggaccaagacttaaagccaaacaga
ctgacatgtactttaaagttgttggaatacttcgtagaagaatattttgaccaaaatcct
attagtcagatcggaataattgtaactaagagtaagagagctgaaaaactgactgaactc
tcaggcaatccaagaaagcacataacatctttgaagaaagctgtagatatgacctgccat
ggagagccatctctttataattccttaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtcgagaagtcctaatcatcttcagcagccttacaacttgtgatccatct
aatatttatgatctaatcaagactctaaaggcagctaaaattagagtgtctgttattgga
ttgtctgcagaggttcgggtctgcaccgtgcttgctcgtgaaactggtggtacataccat
gttattttagatgaaagtcattacaaagagttgctgacacatcatgttagtcctcctcct
gctgtctcaagttctgaatgctcacttattcgtatgggatttcctcaacacaccattgct
tctttgtctgatcaagatgcaaaaccttctttcagcatggcgcatttggatagcaatact
gagccaggacttacattaggaggctatttctgcccacagtgtcgagcgaagtactgtgag
cttcctgttgaatgtaaaatatgtggtctcactttggtttctgctccccatttggcacgg
tcttaccatcacttatttcctctggatgcttttcaagaaattctcctagaagaatataat
ggagaaagattttgctatggatgtcagggggaattgaaagaccaacatgtgtatatttgc
tctgtgtgccaaaatgttttctgtgtggactgcgatgtttttgttcatgattctcttcac
tgttgtcctgggtgtattcataagattccagccccttcagagagaagaaaagtgagaaag
caagctgacaggtctggaacaagagctgcagtcgctcatgtggaagtttag
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