Tupaia chinensis (Chinese tree shrew): 102493599 Help Entry 102493599         CDS       T02978                                  Symbol LIG4 Name (RefSeq) DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:tup00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     102493599 (LIG4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tup03400]     102493599 (LIG4) Enzymes [BR:tup01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      102493599 (LIG4) DNA repair and recombination proteins [BR:tup03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      102493599 (LIG4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_IV DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme LIG3_BRCT Motif Other DBs NCBI-GeneID:  102493599 NCBI-ProteinID:  XP_006159698 LinkDB All DBs Position Un AA seq 911 aa AA seqDB search MAASQTSQTVASHVPFADLCSTLERIQKSKGRADKIRHFREFLDSWRKFHDALHKNQKNV TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTRG DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSA LEQKWLIRMIVKDLKLGVSQQTIFSAFHNDAAELHNVTTDLEKVCRQLHDPTVGLSDISI TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYDYTD QFGASPREGSLTPFIHNAFKTDIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVEDSEL QTCYCVFDVLMVNNKKLGHETLRKRYEILSSTFAPILGRVEIVQKTQAHTKNEVIDALNE AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSRGGMM SHFLCAVAENPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKSPPSSILC GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIERIRDDKVWHECMTLGDLE QLRGKASGKLASKHYFLGGDDEPREKKRRTAPKTRKVIGIIQHLKAPNLSNINKVSDIFE DVEFCVMNGLDSHPKSDLENRIAEFGGYIVQNPGPDTYCVIAGSENVRVKNIISSNKHDV VKPEWLLQCFETKSCVPWQPRFMIHMCPSTKQHFAHQYDCYGDSYFVDTDLNQLKEVFSG IKHSEEQTPENMASVIADLEYRYVWDHSPLSMFRHHTIYVDLYTVINDLSTKIKGTRLII KALELRFHGAKIVPCLAEGVSHVIIGADHTRVADFKAFRRTLKRKFKILQEDWVTDSIDK CELQEENQYLI NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt atggctgcctctcaaacttcacaaactgttgcatcacatgttccttttgcagatttatgt tcaactttagaacgaatacaaaagagtaaaggacgtgcagataaaattagacattttaga gaatttttagattcttggagaaaatttcacgatgcccttcataagaaccagaaaaatgtc acagactctttttatccagcaatgagacttattcttccccagttggaaagagagagaatg gcttatggaatcaaagaaactatgcttgctaaactttatattgaattgcttaatttacct agagatggaaaagatgcccttaaacttttaaattacagaactcctacaggaactcgtgga gatgctggggactttgcaatgattgcatactttgtattgaagccaagatgtttacaaaaa ggaagtttaaccatacagcaagtaaatgaccttttagactcagttgccagcaacaattct gccaaaagaaaagacttaattaaaaagagccttctgcaacttataactcagagttcagca cttgaacaaaaatggcttatacgcatgattgtaaaggacttaaaacttggtgttagtcag caaactatattttctgcttttcataatgatgctgctgagttgcataatgtcaccacagat ctggaaaaagtctgtaggcaactgcatgatcctactgtaggactcagtgacatttctatt actttattttctgcctttaagccaatgctagccgctatagcagatatcgagcgaattgag aaggacatgaaacaccagagtttctacatcgaaaccaagctggatggtgagcggatgcaa atgcacaaggatggggatgtttatcagtacttctcccggaatggatatgactacactgat cagtttggtgcttctccacgtgaaggttctcttaccccattcattcataatgcattcaaa acagatatacagaactgtatccttgatggtgagatgatggcctataaccctgagacccaa acgtttatgcaaaaagggaataaatttgacattaagagaatggtagaagattctgaacta cagacttgttactgtgtttttgatgtattgatggttaataataaaaagctaggacacgag accctaagaaagaggtatgagattcttagtagtacttttgcaccaatactgggtagagtg gaaatagtgcagaagacacaagctcatactaagaatgaagtaattgatgcattgaatgaa gcaatagataaaagagaagagggaatcatgataaaacatcctctgtccatttataagcca gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcagtggcctaatggat gaattggacatcctgattgttggaggctattggggtaaaggttcacggggtgggatgatg tctcattttttgtgtgctgtagcggagaatccccctcctggtgaaaagccttctgtgttt catactctttgtcgtgttggctcaggttacaccatgaaagaactgtatgatctgggtttg aaactggccaaacattggaagcctttccataagaaatctccaccaagtagcattttatgt gggacagagaagcccgaagtgtatattgaaccttgtaattccgtcattgttcagattaag gcagcagagattgtccccagcgacatgtataaaactggctgcacgttgcgtttcccacgt attgaaaggataagagatgacaaagtttggcacgaatgcatgaccctgggtgacttggaa caactgaggggaaaggcttctggaaagcttgcgtctaaacactacttcctgggtggagat gatgagccacgagaaaaaaaacggagaactgccccaaagacgaggaaagttattggaatt atccagcacttaaaagcacctaatctttctaacataaacaaagtttctgacatatttgag gatgtagagttttgcgttatgaatggattagacagccatccaaagtctgacctagagaat agaattgcagaatttggtggatatatagttcaaaatccaggtccagacacatactgcgta attgcagggtctgagaacgtcagagtgaaaaacatcatttcttcaaataaacatgatgtc gtcaagcctgagtggcttttacagtgttttgagaccaaaagctgtgtgccatggcagccc cgttttatgattcatatgtgcccatcaaccaaacagcattttgcccatcagtatgattgc tatggtgatagctactttgttgatacagatttgaaccaactgaaggaagtgttctcagga attaaacattctgaagaacagactcctgaaaacatggcttctgtgattgccgatttagag tatcgttatgtctgggaccactctccactcagtatgtttcgacaccacaccatttatgtg gatttgtatactgttattaatgacttgagtaccaaaatcaaggggacaagattaatcatt aaagctttggagcttcgatttcatggagcaaaaatagttccttgcttagctgagggagta tctcatgtaattattggggcagatcatactcgtgttgcagactttaaagcttttagaaga actcttaagagaaagtttaaaattttacaagaagattgggtaactgattcaatagacaag tgtgaattacaggaggaaaaccagtatttgatttaa

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