Tupaia chinensis (Chinese tree shrew): 102500686
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Entry
102500686 CDS
T02978
Symbol
DDX55
Name
(RefSeq) DEAD-box helicase 55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tup03009
]
102500686 (DDX55)
Enzymes [BR:
tup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102500686 (DDX55)
Ribosome biogenesis [BR:
tup03009
]
Eukaryotic type
Pre-60S particles
Helicases
102500686 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
102500686
NCBI-ProteinID:
XP_006149293
LinkDB
All DBs
Position
Un
AA seq
600 aa
AA seq
DB search
MEHVTEGSWESLPVALHPRGPGAXRELGFPHMTPVQSATIPLFMRNKDVAAEAVTGSGKT
LAFVIPILEILLKREEKLKKNQVGAVVITPTRELAIQIDEVLSHFTKHFPQLSQILWIGG
RNPGEDVEKFKQQGGNIIVATPGRLEDMFRRKAEGVDLASCMRSLEVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENFYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVTTMCIH
GKMKDKRNKIFMDFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLAINQKCPLQEMKLQKHTVDLLPKLKSMALTDRAVFEK
GMRAFVSFVQAYAKHECSLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDIN
TDTIPFKDKAREKQRQKLLAQQKEDKKENEGRRKFVKNKAWSKQKARKEKKKKMNDKRKR
AEGSDIDDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSGKKPMMMTALGVSDSEDDG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtcacggagggttcctgggagtcgctgcccgtggcgctgcacccgcggggg
ccgggggcgnnccgggagctgggcttcccccacatgacgccggtgcagtccgcaaccatc
cccctgttcatgaggaacaaagacgtggctgcagaagcggtcacaggcagtggcaaaaca
ctggcttttgtcatccccatcctggaaattcttctgaaaagggaagagaagttaaaaaag
aaccaggtcggagccgtagtcatcactcccacccgagagctggccatccagatagacgag
gtcctgtcgcatttcaccaagcacttcccgcagctcagccagatcctgtggattggaggc
cggaaccctggagaagatgtggagaagtttaagcagcagggcgggaacatcatcgtggcg
actccaggccgcttggaggacatgttccgtaggaaggctgagggtgtggacttggccagc
tgcatgaggtccctggaagtcctggtgctggacgaagctgacagacttctggacatgggc
tttgaggcaagcatcaacaccatactggagttcttgccaaagcagaggaggacgggcctt
ttctccgccacacagacacaggaagtggagaacttggtgagagcaggcctccggaaccct
gtccggatctcagtgaaggagaagggcgtggcagccagcagcacccagaagaccccctcc
cgcctggagaacttctacatggtatgtaaggccgacgagaaatttaatcagctggtacat
tttcttcgaaatcataagcaggagaaacacctggtcttcttcagcacctgcgcctgcgtg
gagtactatggcaaggccctggaggccctggtgaagggtgtgacgaccatgtgcattcac
gggaagatgaaggacaagcgcaacaagatcttcatggacttccgcaagttgcagagcggg
attttagtgtgcaccgatgtgatggcccgaggaatcgatattcctgaagtgaactgggtg
ctgcagtacgaccctcccagcagcgccagtgccttcgtgcatcgctgcggccgcactgcc
cgcatcggccatggaggcagcgctctggtgttcctcctgcccatggaagagtcatacgtc
agtttcctcgcaattaaccagaaatgtcccctccaggagatgaaactccagaaacacaca
gtcgacctcctgcccaagctcaagtccatggccctgactgacagagctgtgtttgaaaag
ggcatgcgagctttcgtgtcattcgtccaggcgtatgcaaagcatgagtgcagcctcatt
ttccgattaaaggatcttgattttgctagtcttgctcgaggttttgctctgctaaggatg
cccaagatgccagaactgagaggaaagcagtttccggattttgtgcctgtggacattaat
acagacacgatcccatttaaagataaagccagagaaaagcagaggcagaaactactagcg
caacaaaaagaagacaagaaagaaaatgaagggagaagaaagtttgtgaagaacaaagca
tggtcgaaacagaaggccagaaaggagaagaagaagaaaatgaatgacaaaaggaaaagg
gccgagggttccgatattgatgatgaggacatggaggaactccttaatgatacaaggctc
ttgaaaaagtttaaaaaaggcaaaattactgaagaagaatttgagaaggggttgttgaca
agtggcaaaaaaccaatgatgatgacagctttaggggtctcagattcggaagacgatggc
tga
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