Tetranychus urticae (two-spotted spider mite): 107363259
Help
Entry
107363259 CDS
T04901
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03013
Nucleocytoplasmic transport
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107363259
09122 Translation
03013 Nucleocytoplasmic transport
107363259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107363259
03041 Spliceosome [BR:
tut03041
]
107363259
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107363259
Spliceosome [BR:
tut03041
]
Complex C
Other components
EJC/TREX
107363259
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107363259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
107363259
NCBI-ProteinID:
XP_015785944
UniProt:
T1KDE4
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MVIVVMESISHQEIRKQVLEYVEKALSEDKVNELLVSCRNLLDKAQAGLEIDIKTAVDTG
FRDVLHKYIRLNTDNDDYQWYEKIIELSIKAVRSGICLGGLPILLLTDLFDCKPLNKCEE
LFSLLENRVNIWKEDIFFNNVKNQMLRSCNDLLRRLSRSQHTVFGGRILEFLARFFPLFE
RSGLNLTSEFNQENVVAISAQEDLSDASSISDSPMEEGEMPTSEVVQVDYNLYRKFWQLQ
SFFKNPNLCYSKPNWKQFQSYSTDVLTAFSTFKLDPQSNKATEKVDIQGEQIHFTKYLTN
QRLLELQLSDSSFRRYILVQFLILFQYLTTYVKSKQESQTLTEEQNAWLKQSNEKVLELI
GKTPPNGQEMTQIIEHILKREEFWCNWKNDGCPGLKEINETISKEPTMVNGRKRVGDEIK
HAESFGKVIIGNPELTKLWNLCSDNLEACLSKKRIFIPPVDEFFGDVKTSYDEYSAEDRQ
KMLADDSDFNWRSLRLLGSKSSYFFTPSNQSMVKPIVQYLDTVIEKVVKELNAADGNKGS
QDLAIDDAEDISNDELLKQIDENSNLGSTDNHAQNEIKRTEEKASV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggtaattgttgtcatggaatcaattagtcaccaagagattcgaaaacaagttttggaa
tatgttgagaaggcattatcggaagataaagtcaatgagcttcttgtatcatgccgcaac
ttgctcgataaagctcaagctggacttgaaatagatattaaaactgctgttgatactgga
tttcgcgatgttttacataaatatataagactgaatacagacaatgatgattatcaatgg
tatgaaaagatcatagaattgtccattaaagccgtacgaagtggaatttgcttgggaggt
ttacctattcttctgttgactgatttatttgactgcaaacccttgaacaaatgtgaagag
ttattctctctactggaaaaccgagtgaacatttggaaggaggacattttttttaacaat
gtgaaaaatcaaatgcttcgatcatgtaatgatttgcttcgtcgattatcaagatcacag
cataccgtgtttggtggaagaatattggaatttcttgctcgatttttccctctttttgaa
agatcaggccttaatcttacatcagagtttaatcaagaaaatgttgtcgctatatccgcc
caagaagatttgtctgatgcttcaagtatttctgattcacctatggaagaaggtgaaatg
ccgacctcagaagtggtacaagttgattataatctttacagaaaattttggcaattacag
tcattcttcaaaaatcctaacctttgctattccaaaccgaactggaagcaatttcagagt
tactcaacagacgttcttactgccttctcaactttcaaacttgatccacaaagcaacaaa
gctacagaaaaggtcgacatccaaggggaacagatccacttcacaaagtatttaacaaac
cagaggctattagaattgcagttaagtgactctagctttagaagatatatccttgtacaa
tttttaatcctttttcaatacttaacaacttacgttaaaagtaaacaagaaagccaaacc
ttaactgaagagcagaatgcttggttgaaacagagcaatgaaaaagttctggaattaata
ggaaagactccaccaaatggacaagaaatgacccagataattgaacacattttaaaaaga
gaagagttttggtgtaactggaaaaatgatggttgtcctggattgaaagaaatcaacgaa
acaatcagtaaagaaccaactatggttaatggtagaaaaagagttggtgatgaaattaaa
catgctgaatcttttggtaaagtcatcattggtaatccagaattaacaaagctatggaac
ttgtgctcggataatttggaagcctgtctcagcaagaaacgtatatttataccacctgtt
gatgaattcttcggtgatgtgaaaacttcatatgatgaatattctgcagaggatcgacag
aaaatgctggcagatgattctgattttaattggagatctttacgcttgttgggctctaaa
tcttcatactttttcacgccaagtaaccaatcgatggttaaacctatagttcaatatctg
gatacagttattgaaaaggttgttaaagagttaaatgctgctgatggtaacaaaggatct
caagatttagctattgatgatgctgaagatatcagtaatgatgaattattgaaacagatt
gatgaaaactctaatctaggttcaaccgacaatcatgctcaaaacgaaattaaaagaacg
gaagagaaagcctctgtatag
DBGET
integrated database retrieval system
