Tetranychus urticae (two-spotted spider mite): 107366933
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Entry
107366933 CDS
T04901
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03022
Basal transcription factors
tut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107366933
09124 Replication and repair
03420 Nucleotide excision repair
107366933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tut03021
]
107366933
03400 DNA repair and recombination proteins [BR:
tut03400
]
107366933
Transcription machinery [BR:
tut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107366933
DNA repair and recombination proteins [BR:
tut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107366933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
107366933
NCBI-ProteinID:
XP_015790063
UniProt:
T1KSU7
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSTTSLSLTNTKTSIRASNLGDYVKNLNPPTIDKLYSKSSSCCLAIFGQLPPLAKQYVIR
LLFVDQGIPKDVISSWVSQSSMQEHLESVKLLSDLRIWSESPIHGGLPGFKLNNTFKNNL
QVALLGGGDPWVIKPCDDKDKHGRDVAFLDQYAMERWECILHFMVGSQGNNESISNDTVK
TLVHAGLIKYDSPAQDKLPAITADGFQFLLMDTKSQVWYFLLQYLDTVESKGLDLVECLT
FLFQISFLTLGKDYSTICLSESMSNFLQHLREFGLIYQRKRKDGRFYPTKLVINLTSASN
SRTDSRREGFIIVETNYRVFAYTNSSLQMALVALFTEMQYRLPNVGLGLLNRDSVRQALK
NGITAEQIINFLRAHAHPKMKKIPPTVVDQIRLWEIERDRFIFKEGFLYSQFLSQGDFSL
LRNYANDAGNLIWDNPSKRVMVVSVAGHEDVRRFWKRHKKDH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccacaagtttgtcattgactaatactaaaactagcattagggcctccaatctc
ggtgattatgttaagaacctgaatccacctactattgataaactttattccaaaagctca
tcatgttgcttggcgatttttggacagctaccccctttagctaaacagtatgtcatcaga
ttgttgtttgttgatcaaggtattccaaaggatgtcatctcgtcatgggtcagccaaagt
tcaatgcaagagcatcttgagtcagtaaaattactctctgatttgagaatttggtcagaa
tctccaattcacggtggcttacccggctttaaattaaataatactttcaagaataacctt
caagtggcacttttaggaggtggtgatccttgggttattaaaccatgcgatgataaagat
aaacatggaagagatgtagcttttcttgatcaatacgccatggaaagatgggaatgtatt
ttacattttatggttggatctcaggggaataatgaaagcatctccaatgacactgtgaaa
actcttgtacatgctggtttgatcaaatatgattcgccagctcaagataaacttccagcc
atcactgccgatggatttcagtttttgttaatggatactaaatctcaagtttggtacttt
ttgctacaatatttagacacggtagaaagtaaaggcttagacttagttgaatgtttaaca
ttcctttttcaaatcagttttttaactctcgggaaggactattcaacgatatgtcttagt
gaatctatgtctaactttcttcaacatctcagagagtttgggttaatatatcaaagaaag
cgtaaagatggacgcttttatccaaccaagctagtcatcaatctaacaagcgcatctaat
tcacgaactgattctcgccgtgaaggctttatcatcgttgaaaccaattatcgagtcttt
gcatacacaaattcatctctgcagatggcattggtagctttattcactgaaatgcaatat
cgattacccaatgttggacttggtttgctaaatcgtgacagtgtccgacaggctctcaaa
aacggtataacggctgagcaaataataaactttctcagagctcatgctcaccctaagatg
aaaaaaatacctccaaccgttgtcgatcagataagactttgggaaattgagcgtgataga
tttattttcaaagaaggatttctttacagtcaatttttgtctcaaggagatttctcgctt
cttaggaattatgcaaatgatgctggtaacttaatttgggacaatccaagtaaaagagtg
atggtagtttccgtggcgggacacgaagatgttagacggttttggaaaaggcacaaaaaa
gatcattaa
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